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INSTALL report for OTUbase on tokay2

This page was generated on 2019-10-16 12:24:15 -0400 (Wed, 16 Oct 2019).

Package 1155/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.34.0
Daniel Beck
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/OTUbase
Branch: RELEASE_3_9
Last Commit: 7a28ded
Last Changed Date: 2019-05-02 11:53:17 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: OTUbase
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/OTUbase_1.34.0.tar.gz && rm -rf OTUbase.buildbin-libdir && mkdir OTUbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OTUbase.buildbin-libdir OTUbase_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL OTUbase_1.34.0.zip && rm OTUbase_1.34.0.tar.gz OTUbase_1.34.0.zip
StartedAt: 2019-10-15 20:10:59 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:12:28 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 88.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/OTUbase_1.34.0.tar.gz && rm -rf OTUbase.buildbin-libdir && mkdir OTUbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OTUbase.buildbin-libdir OTUbase_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL OTUbase_1.34.0.zip && rm OTUbase_1.34.0.tar.gz OTUbase_1.34.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 88728  100 88728    0     0   509k      0 --:--:-- --:--:-- --:--:--  531k

install for i386

* installing *source* package 'OTUbase' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OTUbase'
    finding HTML links ... done
    OTUbase-package                         html  
    OTUset-class                            html  
    TAXset-class                            html  
    abundance                               html  
    accessors                               html  
    finding level-2 HTML links ... done

    assignmentData                          html  
    clusterSamples                          html  
    other_functions                         html  
    other_generics                          html  
    readOTUset                              html  
    readTAXset                              html  
    sampleData                              html  
    subOTUset                               html  
    subTAXset                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'OTUbase' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OTUbase' as OTUbase_1.34.0.zip
* DONE (OTUbase)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'OTUbase' successfully unpacked and MD5 sums checked