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INSTALL report for NOISeq on tokay2

This page was generated on 2019-10-16 12:27:05 -0400 (Wed, 16 Oct 2019).

Package 1107/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NOISeq 2.28.0
Sonia Tarazona
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/NOISeq
Branch: RELEASE_3_9
Last Commit: 4c30f09
Last Changed Date: 2019-05-02 11:53:39 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: NOISeq
Version: 2.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/NOISeq_2.28.0.tar.gz && rm -rf NOISeq.buildbin-libdir && mkdir NOISeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NOISeq.buildbin-libdir NOISeq_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL NOISeq_2.28.0.zip && rm NOISeq_2.28.0.tar.gz NOISeq_2.28.0.zip
StartedAt: 2019-10-15 18:56:59 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:57:37 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 38.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/NOISeq_2.28.0.tar.gz && rm -rf NOISeq.buildbin-libdir && mkdir NOISeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NOISeq.buildbin-libdir NOISeq_2.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL NOISeq_2.28.0.zip && rm NOISeq_2.28.0.tar.gz NOISeq_2.28.0.zip
###
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100  758k  100  758k    0     0  4786k      0 --:--:-- --:--:-- --:--:-- 4989k

install for i386

* installing *source* package 'NOISeq' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NOISeq'
    finding HTML links ... done
    ARSyNSeq                                html  
    Biodetection                            html  
    CD                                      html  
    CountsBio                               html  
    DE.plot                                 html  
    GCcontentBias                           html  
    LengthBias                              html  
    Marioni                                 html  
    Output                                  html  
    PCA.GENES                               html  
    PCA                                     html  
    QCreport                                html  
    Saturation                              html  
    dat                                     html  
    dat2save                                html  
    degenes                                 html  
    example                                 html  
    explo.plot                              html  
    filter.low.counts                       html  
    myCounts                                html  
    noiseq                                  html  
    noiseqbio                               html  
    normalization                           html  
    readData                                html  
** building package indices
** installing vignettes
   'NOISeq.Rnw' using 'UTF-8' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'NOISeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NOISeq' as NOISeq_2.28.0.zip
* DONE (NOISeq)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'NOISeq' successfully unpacked and MD5 sums checked