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INSTALL report for Mergeomics on tokay2

This page was generated on 2019-10-16 12:34:57 -0400 (Wed, 16 Oct 2019).

Package 950/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Mergeomics 1.12.0
Zeyneb Kurt
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/Mergeomics
Branch: RELEASE_3_9
Last Commit: 8723c7e
Last Changed Date: 2019-05-02 11:54:00 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Mergeomics
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Mergeomics_1.12.0.tar.gz && rm -rf Mergeomics.buildbin-libdir && mkdir Mergeomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Mergeomics.buildbin-libdir Mergeomics_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Mergeomics_1.12.0.zip && rm Mergeomics_1.12.0.tar.gz Mergeomics_1.12.0.zip
StartedAt: 2019-10-15 18:39:50 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:41:50 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 119.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/Mergeomics_1.12.0.tar.gz && rm -rf Mergeomics.buildbin-libdir && mkdir Mergeomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Mergeomics.buildbin-libdir Mergeomics_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL Mergeomics_1.12.0.zip && rm Mergeomics_1.12.0.tar.gz Mergeomics_1.12.0.zip
###
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100 2971k  100 2971k    0     0  26.8M      0 --:--:-- --:--:-- --:--:-- 28.4M

install for i386

* installing *source* package 'Mergeomics' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Mergeomics'
    finding HTML links ... done
    MSEA.KDA.onestep                        html  
    Mergeomics-package                      html  
    job.kda                                 html  
    kda.analyze                             html  
    kda.analyze.exec                        html  
    kda.analyze.simulate                    html  
    kda.analyze.test                        html  
    kda.configure                           html  
    kda.finish                              html  
    kda.finish.estimate                     html  
    kda.finish.save                         html  
    kda.finish.summarize                    html  
    kda.finish.trim                         html  
    kda.prepare                             html  
    kda.prepare.overlap                     html  
    kda.prepare.screen                      html  
    kda.start                               html  
    kda.start.edges                         html  
    kda.start.identify                      html  
    kda.start.modules                       html  
    kda2cytoscape                           html  
    kda2cytoscape.colorize                  html  
    kda2cytoscape.colormap                  html  
    kda2cytoscape.drivers                   html  
    kda2cytoscape.edges                     html  
    kda2cytoscape.exec                      html  
    kda2cytoscape.identify                  html  
    kda2himmeli                             html  
    kda2himmeli.colorize                    html  
    kda2himmeli.colormap                    html  
    kda2himmeli.drivers                     html  
    kda2himmeli.edges                       html  
    kda2himmeli.exec                        html  
    kda2himmeli.identify                    html  
    ssea.analyze                            html  
    ssea.analyze.observe                    html  
    ssea.analyze.randgenes                  html  
    ssea.analyze.randloci                   html  
    ssea.analyze.simulate                   html  
    ssea.analyze.statistic                  html  
    ssea.control                            html  
    ssea.finish                             html  
    ssea.finish.details                     html  
    ssea.finish.fdr                         html  
    ssea.finish.genes                       html  
    ssea.meta                               html  
    ssea.prepare                            html  
    ssea.prepare.counts                     html  
    ssea.prepare.structure                  html  
    ssea.start                              html  
    ssea.start.configure                    html  
    ssea.start.identify                     html  
    ssea.start.relabel                      html  
    ssea2kda                                html  
    ssea2kda.analyze                        html  
    ssea2kda.import                         html  
    tool.aggregate                          html  
    tool.cluster                            html  
    tool.cluster.static                     html  
    tool.coalesce                           html  
    tool.coalesce.exec                      html  
    tool.coalesce.find                      html  
    tool.coalesce.merge                     html  
    tool.fdr                                html  
    tool.fdr.bh                             html  
    tool.fdr.empirical                      html  
    tool.graph                              html  
    tool.graph.degree                       html  
    tool.graph.list                         html  
    tool.metap                              html  
    tool.normalize                          html  
    tool.normalize.quality                  html  
    tool.overlap                            html  
    tool.read                               html  
    tool.save                               html  
    tool.subgraph                           html  
    tool.subgraph.find                      html  
    tool.subgraph.search                    html  
    tool.subgraph.stats                     html  
    tool.translate                          html  
    tool.unify                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Mergeomics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Mergeomics' as Mergeomics_1.12.0.zip
* DONE (Mergeomics)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'Mergeomics' successfully unpacked and MD5 sums checked