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INSTALL report for MOFA on tokay2

This page was generated on 2019-10-16 12:43:50 -0400 (Wed, 16 Oct 2019).

Package 1033/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MOFA 1.0.0
Britta Velten
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/MOFA
Branch: RELEASE_3_9
Last Commit: d66907c
Last Changed Date: 2019-05-02 11:54:15 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: MOFA
Version: 1.0.0
Command: C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch MOFA
StartedAt: 2019-10-15 20:08:11 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:09:31 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 80.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch MOFA
###
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* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
* installing *source* package 'MOFA' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MOFA'
    finding HTML links ... done
    DataOptions                             html  
    Dimensions                              html  
    Expectations                            html  
    FeatureIntercepts                       html  
    ImputedData                             html  
    InputData                               html  
    MOFA                                    html  
    MOFAmodel                               html  
    ModelOptions                            html  
    Status                                  html  
    TrainData                               html  
    TrainOptions                            html  
    TrainStats                              html  
    calculateVarianceExplained              html  
    clusterSamples                          html  
    compareFactors                          html  
    compareModels                           html  
    createMOFAobject                        html  
    finding level-2 HTML links ... done

    factorNames                             html  
    featureNames                            html  
    getCovariates                           html  
    getDefaultDataOptions                   html  
    getDefaultModelOptions                  html  
    getDefaultTrainOptions                  html  
    getDimensions                           html  
    getELBO                                 html  
    getExpectations                         html  
    getFactors                              html  
    getImputedData                          html  
    getTrainData                            html  
    getWeights                              html  
    impute                                  html  
    loadModel                               html  
    makeExampleData                         html  
    plotDataHeatmap                         html  
    plotDataOverview                        html  
    plotDataScatter                         html  
    plotEnrichment                          html  
    plotEnrichmentBars                      html  
    plotEnrichmentDetailed                  html  
    plotEnrichmentHeatmap                   html  
    plotFactorBeeswarm                      html  
    plotFactorCor                           html  
    plotFactorHist                          html  
    plotFactorScatter                       html  
    plotFactorScatters                      html  
    plotTopWeights                          html  
    plotVarianceExplained                   html  
    plotWeights                             html  
    plotWeightsHeatmap                      html  
    predict                                 html  
    prepareMOFA                             html  
    qualityControl                          html  
    regressCovariates                       html  
    runEnrichmentAnalysis                   html  
    runMOFA                                 html  
    sampleNames                             html  
    selectModel                             html  
    subsetFactors                           html  
    subsetSamples                           html  
    subsetViews                             html  
    trainCurveELBO                          html  
    trainCurveFactors                       html  
    viewNames                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MOFA)
Making 'packages.html' ... done