Nathan Sheffield
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/LOLA |
| Branch: RELEASE_3_9 |
| Last Commit: 3e4dc7c |
| Last Changed Date: 2019-05-02 11:53:57 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:33:58 -0400 (Wed, 16 Oct 2019).
| Package 885/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| LOLA 1.14.0 Nathan Sheffield
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: LOLA |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/LOLA_1.14.0.tar.gz && rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOLA.buildbin-libdir LOLA_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL LOLA_1.14.0.zip && rm LOLA_1.14.0.tar.gz LOLA_1.14.0.zip |
| StartedAt: 2019-10-15 20:00:25 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 20:01:14 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 48.5 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/LOLA_1.14.0.tar.gz && rm -rf LOLA.buildbin-libdir && mkdir LOLA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LOLA.buildbin-libdir LOLA_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL LOLA_1.14.0.zip && rm LOLA_1.14.0.tar.gz LOLA_1.14.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 533k 100 533k 0 0 1647k 0 --:--:-- --:--:-- --:--:-- 1687k
install for i386
* installing *source* package 'LOLA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'LOLA'
finding HTML links ... done
LOLA html
buildRestrictedUniverse html
checkUniverseAppropriateness html
cleanws html
countOverlapsAnyRev html
extractEnrichmentOverlaps html
getRegionFile html
getRegionSet html
lapplyAlias html
listRegionSets html
listToGRangesList html
loadRegionDB html
mergeRegionDBs html
nlist html
plotTopLOLAEnrichments html
readBed html
readCollection html
readCollectionAnnotation html
readCollectionFiles html
readRegionGRL html
readRegionSetAnnotation html
redefineUserSets html
replaceFileExtension html
runLOLA html
sampleGRL html
setLapplyAlias html
setSharedDataDir html
splitDataTable html
splitFileIntoCollection html
userSets html
userUniverse html
write.tsv html
writeCombinedEnrichment html
writeDataTableSplitByColumn html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'LOLA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LOLA' as LOLA_1.14.0.zip
* DONE (LOLA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'LOLA' successfully unpacked and MD5 sums checked