Eric Frichot
| Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019) |
| URL: https://git.bioconductor.org/packages/LEA |
| Branch: RELEASE_3_9 |
| Last Commit: 8905c05 |
| Last Changed Date: 2019-05-02 11:53:53 -0400 (Thu, 02 May 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-10-16 12:32:38 -0400 (Wed, 16 Oct 2019).
| Package 865/1741 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| LEA 2.6.0 Eric Frichot
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: LEA |
| Version: 2.6.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/LEA_2.6.0.tar.gz && rm -rf LEA.buildbin-libdir && mkdir LEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LEA.buildbin-libdir LEA_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL LEA_2.6.0.zip && rm LEA_2.6.0.tar.gz LEA_2.6.0.zip |
| StartedAt: 2019-10-15 18:53:21 -0400 (Tue, 15 Oct 2019) |
| EndedAt: 2019-10-15 18:55:16 -0400 (Tue, 15 Oct 2019) |
| EllapsedTime: 115.4 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/LEA_2.6.0.tar.gz && rm -rf LEA.buildbin-libdir && mkdir LEA.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=LEA.buildbin-libdir LEA_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL LEA_2.6.0.zip && rm LEA_2.6.0.tar.gz LEA_2.6.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 326k 100 326k 0 0 3054k 0 --:--:-- --:--:-- --:--:-- 3299k
install for i386
* installing *source* package 'LEA' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_LFMM.c -o R_LFMM.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_crossEntropy.c -o R_crossEntropy.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_createDataSet.c -o R_createDataSet.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_sNMF.c -o R_sNMF.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_ancestrymap2geno.c -o R_ancestrymap2geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_ancestrymap2lfmm.c -o R_ancestrymap2lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_geno2lfmm.c -o R_geno2lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_lfmm2geno.c -o R_lfmm2geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_pca.c -o R_pca.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_ped2geno.c -o R_ped2geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_ped2lfmm.c -o R_ped2lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_vcf2geno.c -o R_vcf2geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_tracyWidom.c -o R_tracyWidom.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c R_init_LEA.c -o R_init_LEA.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c bituint/bituint.c -o bituint/bituint.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c bituint/calc_bituint.c -o bituint/calc_bituint.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c bituint/io_geno_bituint.c -o bituint/io_geno_bituint.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c bituint/slice_bituint.c -o bituint/slice_bituint.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c bituint/thread_bituint.c -o bituint/thread_bituint.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/ancestrymap.c -o convert/ancestrymap.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/geno.c -o convert/geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/ped.c -o convert/ped.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/vcf2geno.c -o convert/vcf2geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/geno2lfmm.c -o convert/geno2lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/lfmm2geno.c -o convert/lfmm2geno.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c convert/register_convert.c -o convert/register_convert.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c createDataSet/createDataSet.c -o createDataSet/createDataSet.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c createDataSet/error_cds.c -o createDataSet/error_cds.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c createDataSet/print_cds.c -o createDataSet/print_cds.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c createDataSet/register_cds.c -o createDataSet/register_cds.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c crossEntropy/crossEntropy.c -o crossEntropy/crossEntropy.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c crossEntropy/error_ce.c -o crossEntropy/error_ce.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c crossEntropy/print_ce.c -o crossEntropy/print_ce.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c crossEntropy/register_ce.c -o crossEntropy/register_ce.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c io/io_data_double.c -o io/io_data_double.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c io/io_data_float.c -o io/io_data_float.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c io/io_data_int.c -o io/io_data_int.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c io/io_error.c -o io/io_error.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c io/io_tools.c -o io/io_tools.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c io/print_bar.c -o io/print_bar.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/beta.c -o LFMM/beta.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/error_lfmm.c -o LFMM/error_lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/lfmm_k0.c -o LFMM/lfmm_k0.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/slice_lfmm.c -o LFMM/slice_lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/U.c -o LFMM/U.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/beta_k0.c -o LFMM/beta_k0.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/lfmm_algo.c -o LFMM/lfmm_algo.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/print_lfmm.c -o LFMM/print_lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/thread_lfmm.c -o LFMM/thread_lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/V.c -o LFMM/V.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/data_lfmm.c -o LFMM/data_lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/LFMM.c -o LFMM/LFMM.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/register_lfmm.c -o LFMM/register_lfmm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c LFMM/thread_var.c -o LFMM/thread_var.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/cholesky.c -o matrix/cholesky.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/error_matrix.c -o matrix/error_matrix.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/normalize.c -o matrix/normalize.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/slice_matrix.c -o matrix/slice_matrix.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/data.c -o matrix/data.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/inverse.c -o matrix/inverse.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/rand.c -o matrix/rand.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/sylvester.c -o matrix/sylvester.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/diagonalize.c -o matrix/diagonalize.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/matrix.c -o matrix/matrix.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/random_projection.c -o matrix/random_projection.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c matrix/thread_matrix.c -o matrix/thread_matrix.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c nnlsm/blockpivot.c -o nnlsm/blockpivot.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c nnlsm/nnlsm.c -o nnlsm/nnlsm.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c nnlsm/solvenormaleqcomb.c -o nnlsm/solvenormaleqcomb.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c nnlsm/sort.c -o nnlsm/sort.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pca/calc_cov.c -o pca/calc_cov.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pca/error_pca.c -o pca/error_pca.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pca/pca.c -o pca/pca.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pca/print_pca.c -o pca/print_pca.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c pca/register_pca.c -o pca/register_pca.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/als.c -o sNMF/als.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/als_k1.c -o sNMF/als_k1.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/criteria.c -o sNMF/criteria.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/print_snmf.c -o sNMF/print_snmf.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/sNMF.c -o sNMF/sNMF.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/thread_Q.c -o sNMF/thread_Q.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/als_F.c -o sNMF/als_F.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/als_Q.c -o sNMF/als_Q.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/error_snmf.c -o sNMF/error_snmf.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/register_snmf.c -o sNMF/register_snmf.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/thread_F.c -o sNMF/thread_F.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c sNMF/thread_snmf.c -o sNMF/thread_snmf.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/beta_distribution.c -o stats/beta_distribution.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/gamma_density.c -o stats/gamma_density.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/ln_beta_function.c -o stats/ln_beta_function.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/beta_function.c -o stats/beta_function.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/gamma_distribution.c -o stats/gamma_distribution.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/ln_gamma_function.c -o stats/ln_gamma_function.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/entire_incomplete_gamma_function.c -o stats/entire_incomplete_gamma_function.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/gamma_dist_tables.c -o stats/gamma_dist_tables.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/student_t_distribution.c -o stats/student_t_distribution.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/factorial.c -o stats/factorial.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c stats/gamma_function.c -o stats/gamma_function.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c tracyWidom/error_tracyWidom.c -o tracyWidom/error_tracyWidom.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c tracyWidom/register_tracyWidom.c -o tracyWidom/register_tracyWidom.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c tracyWidom/print_tracyWidom.c -o tracyWidom/print_tracyWidom.o
C:/Rtools/mingw_32/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O3 -Wall -std=gnu99 -mtune=generic -c tracyWidom/tracyWidom.c -o tracyWidom/tracyWidom.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o LEA.dll tmp.def R_LFMM.o R_crossEntropy.o R_createDataSet.o R_sNMF.o R_ancestrymap2geno.o R_ancestrymap2lfmm.o R_geno2lfmm.o R_lfmm2geno.o R_pca.o R_ped2geno.o R_ped2lfmm.o R_vcf2geno.o R_tracyWidom.o R_init_LEA.o bituint/bituint.o bituint/calc_bituint.o bituint/io_geno_bituint.o bituint/slice_bituint.o bituint/thread_bituint.o convert/ancestrymap.o convert/geno.o convert/ped.o convert/vcf2geno.o convert/geno2lfmm.o convert/lfmm2geno.o convert/register_convert.o createDataSet/createDataSet.o createDataSet/error_cds.o createDataSet/print_cds.o createDataSet/register_cds.o crossEntropy/crossEntropy.o crossEntropy/error_ce.o crossEntropy/print_ce.o crossEntropy/register_ce.o io/io_data_double.o io/io_data_float.o io/io_data_int.o io/io_error.o io/io_tools.o io/print_bar.o LFMM/beta.o LFMM/error_lfmm.o LFMM/lfmm_k0.o LFMM/slice_lfmm.o LFMM/U.o LFMM/beta_k0.o LFMM/lfmm_algo.o LFMM/print_lfmm.o LFMM/thread_lfmm.o LFMM/V.o LFMM/data_lfmm.o LFMM/LFMM.o LFMM/register_lfmm.o LFMM/thread_var.o matrix/cholesky.o matrix/error_matrix.o matrix/normalize.o matrix/slice_matrix.o matrix/data.o matrix/inverse.o matrix/rand.o matrix/sylvester.o matrix/diagonalize.o matrix/matrix.o matrix/random_projection.o matrix/thread_matrix.o nnlsm/blockpivot.o nnlsm/nnlsm.o nnlsm/solvenormaleqcomb.o nnlsm/sort.o pca/calc_cov.o pca/error_pca.o pca/pca.o pca/print_pca.o pca/register_pca.o sNMF/als.o sNMF/als_k1.o sNMF/criteria.o sNMF/print_snmf.o sNMF/sNMF.o sNMF/thread_Q.o sNMF/als_F.o sNMF/als_Q.o sNMF/error_snmf.o sNMF/register_snmf.o sNMF/thread_F.o sNMF/thread_snmf.o stats/beta_distribution.o stats/gamma_density.o stats/ln_beta_function.o stats/beta_function.o stats/gamma_distribution.o stats/ln_gamma_function.o stats/entire_incomplete_gamma_function.o stats/gamma_dist_tables.o stats/student_t_distribution.o stats/factorial.o stats/gamma_function.o tracyWidom/error_tracyWidom.o tracyWidom/register_tracyWidom.o tracyWidom/print_tracyWidom.o tracyWidom/tracyWidom.o -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/LEA.buildbin-libdir/00LOCK-LEA/00new/LEA/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'LEA'
finding HTML links ... done
G html
Q html
Replop-package html
ancestrymap html
ancestrymap2geno html
ancestrymap2lfmm html
barchart html
crossEntropy html
env html
geno html
geno2lfmm html
impute html
lfmm html
lfmm2geno html
lfmm_pvalues html
main_LFMM html
main_createDataSet html
main_crossEntropyEstimation html
main_pca html
main_sNMF html
main_tracyWidom html
ped html
ped2geno html
ped2lfmm html
readEnv html
readGeno html
readLfmm html
readZscore html
snmf_pvalues html
struct2geno html
tutorial html
vcf html
vcf2geno html
vcf2lfmm html
writeEnv html
writeGeno html
writeLFMM html
zscore html
zscores html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'LEA' ...
** libs
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_LFMM.c -o R_LFMM.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_crossEntropy.c -o R_crossEntropy.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_createDataSet.c -o R_createDataSet.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_sNMF.c -o R_sNMF.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_ancestrymap2geno.c -o R_ancestrymap2geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_ancestrymap2lfmm.c -o R_ancestrymap2lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_geno2lfmm.c -o R_geno2lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_lfmm2geno.c -o R_lfmm2geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_pca.c -o R_pca.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_ped2geno.c -o R_ped2geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_ped2lfmm.c -o R_ped2lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_vcf2geno.c -o R_vcf2geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_tracyWidom.c -o R_tracyWidom.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c R_init_LEA.c -o R_init_LEA.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c bituint/bituint.c -o bituint/bituint.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c bituint/calc_bituint.c -o bituint/calc_bituint.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c bituint/io_geno_bituint.c -o bituint/io_geno_bituint.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c bituint/slice_bituint.c -o bituint/slice_bituint.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c bituint/thread_bituint.c -o bituint/thread_bituint.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/ancestrymap.c -o convert/ancestrymap.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/geno.c -o convert/geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/ped.c -o convert/ped.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/vcf2geno.c -o convert/vcf2geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/geno2lfmm.c -o convert/geno2lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/lfmm2geno.c -o convert/lfmm2geno.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c convert/register_convert.c -o convert/register_convert.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c createDataSet/createDataSet.c -o createDataSet/createDataSet.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c createDataSet/error_cds.c -o createDataSet/error_cds.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c createDataSet/print_cds.c -o createDataSet/print_cds.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c createDataSet/register_cds.c -o createDataSet/register_cds.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c crossEntropy/crossEntropy.c -o crossEntropy/crossEntropy.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c crossEntropy/error_ce.c -o crossEntropy/error_ce.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c crossEntropy/print_ce.c -o crossEntropy/print_ce.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c crossEntropy/register_ce.c -o crossEntropy/register_ce.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c io/io_data_double.c -o io/io_data_double.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c io/io_data_float.c -o io/io_data_float.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c io/io_data_int.c -o io/io_data_int.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c io/io_error.c -o io/io_error.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c io/io_tools.c -o io/io_tools.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c io/print_bar.c -o io/print_bar.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/beta.c -o LFMM/beta.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/error_lfmm.c -o LFMM/error_lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/lfmm_k0.c -o LFMM/lfmm_k0.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/slice_lfmm.c -o LFMM/slice_lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/U.c -o LFMM/U.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/beta_k0.c -o LFMM/beta_k0.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/lfmm_algo.c -o LFMM/lfmm_algo.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/print_lfmm.c -o LFMM/print_lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/thread_lfmm.c -o LFMM/thread_lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/V.c -o LFMM/V.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/data_lfmm.c -o LFMM/data_lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/LFMM.c -o LFMM/LFMM.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/register_lfmm.c -o LFMM/register_lfmm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c LFMM/thread_var.c -o LFMM/thread_var.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/cholesky.c -o matrix/cholesky.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/error_matrix.c -o matrix/error_matrix.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/normalize.c -o matrix/normalize.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/slice_matrix.c -o matrix/slice_matrix.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/data.c -o matrix/data.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/inverse.c -o matrix/inverse.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/rand.c -o matrix/rand.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/sylvester.c -o matrix/sylvester.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/diagonalize.c -o matrix/diagonalize.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/matrix.c -o matrix/matrix.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/random_projection.c -o matrix/random_projection.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c matrix/thread_matrix.c -o matrix/thread_matrix.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c nnlsm/blockpivot.c -o nnlsm/blockpivot.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c nnlsm/nnlsm.c -o nnlsm/nnlsm.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c nnlsm/solvenormaleqcomb.c -o nnlsm/solvenormaleqcomb.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c nnlsm/sort.c -o nnlsm/sort.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pca/calc_cov.c -o pca/calc_cov.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pca/error_pca.c -o pca/error_pca.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pca/pca.c -o pca/pca.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pca/print_pca.c -o pca/print_pca.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c pca/register_pca.c -o pca/register_pca.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/als.c -o sNMF/als.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/als_k1.c -o sNMF/als_k1.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/criteria.c -o sNMF/criteria.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/print_snmf.c -o sNMF/print_snmf.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/sNMF.c -o sNMF/sNMF.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/thread_Q.c -o sNMF/thread_Q.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/als_F.c -o sNMF/als_F.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/als_Q.c -o sNMF/als_Q.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/error_snmf.c -o sNMF/error_snmf.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/register_snmf.c -o sNMF/register_snmf.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/thread_F.c -o sNMF/thread_F.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c sNMF/thread_snmf.c -o sNMF/thread_snmf.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/beta_distribution.c -o stats/beta_distribution.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/gamma_density.c -o stats/gamma_density.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/ln_beta_function.c -o stats/ln_beta_function.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/beta_function.c -o stats/beta_function.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/gamma_distribution.c -o stats/gamma_distribution.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/ln_gamma_function.c -o stats/ln_gamma_function.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/entire_incomplete_gamma_function.c -o stats/entire_incomplete_gamma_function.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/gamma_dist_tables.c -o stats/gamma_dist_tables.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/student_t_distribution.c -o stats/student_t_distribution.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/factorial.c -o stats/factorial.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c stats/gamma_function.c -o stats/gamma_function.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c tracyWidom/error_tracyWidom.c -o tracyWidom/error_tracyWidom.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c tracyWidom/register_tracyWidom.c -o tracyWidom/register_tracyWidom.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c tracyWidom/print_tracyWidom.c -o tracyWidom/print_tracyWidom.o
C:/Rtools/mingw_64/bin/gcc -I"C:/Users/BIOCBU~1/BBS-3~1.9-B/R/include" -DNDEBUG -I. -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mtune=generic -c tracyWidom/tracyWidom.c -o tracyWidom/tracyWidom.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o LEA.dll tmp.def R_LFMM.o R_crossEntropy.o R_createDataSet.o R_sNMF.o R_ancestrymap2geno.o R_ancestrymap2lfmm.o R_geno2lfmm.o R_lfmm2geno.o R_pca.o R_ped2geno.o R_ped2lfmm.o R_vcf2geno.o R_tracyWidom.o R_init_LEA.o bituint/bituint.o bituint/calc_bituint.o bituint/io_geno_bituint.o bituint/slice_bituint.o bituint/thread_bituint.o convert/ancestrymap.o convert/geno.o convert/ped.o convert/vcf2geno.o convert/geno2lfmm.o convert/lfmm2geno.o convert/register_convert.o createDataSet/createDataSet.o createDataSet/error_cds.o createDataSet/print_cds.o createDataSet/register_cds.o crossEntropy/crossEntropy.o crossEntropy/error_ce.o crossEntropy/print_ce.o crossEntropy/register_ce.o io/io_data_double.o io/io_data_float.o io/io_data_int.o io/io_error.o io/io_tools.o io/print_bar.o LFMM/beta.o LFMM/error_lfmm.o LFMM/lfmm_k0.o LFMM/slice_lfmm.o LFMM/U.o LFMM/beta_k0.o LFMM/lfmm_algo.o LFMM/print_lfmm.o LFMM/thread_lfmm.o LFMM/V.o LFMM/data_lfmm.o LFMM/LFMM.o LFMM/register_lfmm.o LFMM/thread_var.o matrix/cholesky.o matrix/error_matrix.o matrix/normalize.o matrix/slice_matrix.o matrix/data.o matrix/inverse.o matrix/rand.o matrix/sylvester.o matrix/diagonalize.o matrix/matrix.o matrix/random_projection.o matrix/thread_matrix.o nnlsm/blockpivot.o nnlsm/nnlsm.o nnlsm/solvenormaleqcomb.o nnlsm/sort.o pca/calc_cov.o pca/error_pca.o pca/pca.o pca/print_pca.o pca/register_pca.o sNMF/als.o sNMF/als_k1.o sNMF/criteria.o sNMF/print_snmf.o sNMF/sNMF.o sNMF/thread_Q.o sNMF/als_F.o sNMF/als_Q.o sNMF/error_snmf.o sNMF/register_snmf.o sNMF/thread_F.o sNMF/thread_snmf.o stats/beta_distribution.o stats/gamma_density.o stats/ln_beta_function.o stats/beta_function.o stats/gamma_distribution.o stats/ln_gamma_function.o stats/entire_incomplete_gamma_function.o stats/gamma_dist_tables.o stats/student_t_distribution.o stats/factorial.o stats/gamma_function.o tracyWidom/error_tracyWidom.o tracyWidom/register_tracyWidom.o tracyWidom/print_tracyWidom.o tracyWidom/tracyWidom.o -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/LEA.buildbin-libdir/LEA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'LEA' as LEA_2.6.0.zip
* DONE (LEA)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'LEA' successfully unpacked and MD5 sums checked