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INSTALL report for IONiseR on tokay2

This page was generated on 2019-10-16 12:33:29 -0400 (Wed, 16 Oct 2019).

Package 826/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.8.0
Mike Smith
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/IONiseR
Branch: RELEASE_3_9
Last Commit: 155d85d
Last Changed Date: 2019-05-02 11:53:55 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: IONiseR
Version: 2.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/IONiseR_2.8.0.tar.gz && rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IONiseR.buildbin-libdir IONiseR_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL IONiseR_2.8.0.zip && rm IONiseR_2.8.0.tar.gz IONiseR_2.8.0.zip
StartedAt: 2019-10-15 20:36:38 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:38:01 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 82.9 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/IONiseR_2.8.0.tar.gz && rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IONiseR.buildbin-libdir IONiseR_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL IONiseR_2.8.0.zip && rm IONiseR_2.8.0.tar.gz IONiseR_2.8.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1154k  100 1154k    0     0  15.9M      0 --:--:-- --:--:-- --:--:-- 17.6M

install for i386

* installing *source* package 'IONiseR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'IONiseR'
    finding HTML links ... done
    Fast5Summary-class                      html  
    IONiseR                                 html  
    baseCalled                              html  
    channelActivityPlot                     html  
    channelHeatmap                          html  
    eventData                               html  
    fast5toFastq                            html  
    fastq                                   html  
    fastq2D                                 html  
    fastqComplement                         html  
    fastqTemplate                           html  
    layoutPlot                              html  
    muxHeatmap                              html  
    plotActiveChannels                      html  
    plotBaseProductionRate                  html  
    plotCurrentByTime                       html  
    plotEventRate                           html  
    plotKmerFrequencyCorrelation            html  
    plotReadAccumulation                    html  
    plotReadCategoryCounts                  html  
    plotReadCategoryQuals                   html  
    plotReadTypeProduction                  html  
    readFast5Log                            html  
    readFast5Summary                        html  
    readInfo                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'IONiseR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IONiseR' as IONiseR_2.8.0.zip
* DONE (IONiseR)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'IONiseR' successfully unpacked and MD5 sums checked