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INSTALL report for GlobalAncova on malbec2

This page was generated on 2019-10-16 11:55:49 -0400 (Wed, 16 Oct 2019).

Package 686/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GlobalAncova 4.2.0
Manuela Hummel
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/GlobalAncova
Branch: RELEASE_3_9
Last Commit: 3585740
Last Changed Date: 2019-05-02 11:53:05 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GlobalAncova
Version: 4.2.0
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL GlobalAncova
StartedAt: 2019-10-15 18:38:02 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:38:26 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 23.8 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL GlobalAncova
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘GlobalAncova’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c GlobalAncova.c -o GlobalAncova.o
GlobalAncova.c: In function ‘permut_withFperm’:
GlobalAncova.c:186:16: warning: ‘ord_perm’ may be used uninitialized in this function [-Wmaybe-uninitialized]
             n1 =  ord_perm[j] ;
             ~~~^~~~~~~~~~~~~~
GlobalAncova.c: In function ‘permut’:
GlobalAncova.c:289:16: warning: ‘ord_perm’ may be used uninitialized in this function [-Wmaybe-uninitialized]
             n1 =  ord_perm[j] ;
             ~~~^~~~~~~~~~~~~~
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c ludcmp.c -o ludcmp.o
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c matrix.c -o matrix.o
gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o GlobalAncova.so GlobalAncova.o ludcmp.o matrix.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-GlobalAncova/00new/GlobalAncova/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GlobalAncova)