Back to Multiple platform build/check report for BioC 3.9
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

INSTALL report for FlowRepositoryR on tokay2

This page was generated on 2019-10-16 12:33:10 -0400 (Wed, 16 Oct 2019).

Package 577/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FlowRepositoryR 1.16.0
Josef Spidlen
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/FlowRepositoryR
Branch: RELEASE_3_9
Last Commit: e8ae547
Last Changed Date: 2019-05-02 11:53:54 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: FlowRepositoryR
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/FlowRepositoryR_1.16.0.tar.gz && rm -rf FlowRepositoryR.buildbin-libdir && mkdir FlowRepositoryR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FlowRepositoryR.buildbin-libdir FlowRepositoryR_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL FlowRepositoryR_1.16.0.zip && rm FlowRepositoryR_1.16.0.tar.gz FlowRepositoryR_1.16.0.zip
StartedAt: 2019-10-15 18:46:48 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 18:47:44 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 55.9 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/FlowRepositoryR_1.16.0.tar.gz && rm -rf FlowRepositoryR.buildbin-libdir && mkdir FlowRepositoryR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FlowRepositoryR.buildbin-libdir FlowRepositoryR_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL FlowRepositoryR_1.16.0.zip && rm FlowRepositoryR_1.16.0.tar.gz FlowRepositoryR_1.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 99752  100 99752    0     0   604k      0 --:--:-- --:--:-- --:--:--  628k

install for i386

* installing *source* package 'FlowRepositoryR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'FlowRepositoryR'
    finding HTML links ... done
    FlowRepositoryR-package                 html  
    attachmentProxy-class                   html  
    download-methods                        html  
    fcsProxy-class                          html  
    fileProxy-class                         html  
    flowRep.get                             html  
    flowRep.ls                              html  
    flowRep.search                          html  
    flowRep.submitGeneStatus                html  
    flowRep.submitImpcResults               html  
    flowRepData-class                       html  
    flowRepOrganization-class               html  
    forgetFlowRepositoryCredentials         html  
    getFlowRepositoryURL                    html  
    id-methods                              html  
    ilarCodeDescription                     html  
    impcCodeDescription                     html  
    impcResultsCopy-methods                 html  
    is.downloaded-methods                   html  
    listKnownIlarCodes                      html  
    setFlowRepositoryCredentials            html  
    setFlowRepositoryURL                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'FlowRepositoryR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'FlowRepositoryR' as FlowRepositoryR_1.16.0.zip
* DONE (FlowRepositoryR)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'FlowRepositoryR' successfully unpacked and MD5 sums checked