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INSTALL report for CompGO on tokay2

This page was generated on 2019-10-16 12:29:38 -0400 (Wed, 16 Oct 2019).

Package 330/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CompGO 1.20.0
Ashley J. Waardenberg
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/CompGO
Branch: RELEASE_3_9
Last Commit: e9f8e94
Last Changed Date: 2019-05-02 11:53:47 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CompGO
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CompGO_1.20.0.tar.gz && rm -rf CompGO.buildbin-libdir && mkdir CompGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CompGO.buildbin-libdir CompGO_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CompGO_1.20.0.zip && rm CompGO_1.20.0.tar.gz CompGO_1.20.0.zip
StartedAt: 2019-10-15 21:02:26 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 21:03:55 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 89.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CompGO_1.20.0.tar.gz && rm -rf CompGO.buildbin-libdir && mkdir CompGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CompGO.buildbin-libdir CompGO_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CompGO_1.20.0.zip && rm CompGO_1.20.0.tar.gz CompGO_1.20.0.zip
###
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100 99659  100 99659    0     0  1421k      0 --:--:-- --:--:-- --:--:-- 1595k

install for i386

* installing *source* package 'CompGO' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CompGO'
    finding HTML links ... done
    PCAplot                                 html  
    annotateBedFromDb                       html  
    bed.sample                              html  
    compareZscores                          html  
    doZtrans.single                         html  
    gata4                                   html  
    getFnAnot_genome                        html  
    mef2a                                   html  
    nkx25                                   html  
    p300                                    html  
    plotDendrogram                          html  
    plotInteractive                         html  
    plotPairwise                            html  
    plotTwoGODags                           html  
    plotZRankedDAG                          html  
    plotZScores                             html  
    slidingJaccard                          html  
    srf                                     html  
    tbx5                                    html  
    viewKegg                                html  
    zTransformDirectory                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CompGO' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CompGO' as CompGO_1.20.0.zip
* DONE (CompGO)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CompGO' successfully unpacked and MD5 sums checked