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INSTALL report for CoRegFlux on tokay2

This page was generated on 2019-10-16 12:43:36 -0400 (Wed, 16 Oct 2019).

Package 347/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CoRegFlux 1.0.0
Pauline Trébulle and Mohamed Elati
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/CoRegFlux
Branch: RELEASE_3_9
Last Commit: d3bd471
Last Changed Date: 2019-05-02 11:54:14 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CoRegFlux
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CoRegFlux_1.0.0.tar.gz && rm -rf CoRegFlux.buildbin-libdir && mkdir CoRegFlux.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CoRegFlux.buildbin-libdir CoRegFlux_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CoRegFlux_1.0.0.zip && rm CoRegFlux_1.0.0.tar.gz CoRegFlux_1.0.0.zip
StartedAt: 2019-10-15 19:41:38 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:42:40 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 62.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CoRegFlux_1.0.0.tar.gz && rm -rf CoRegFlux.buildbin-libdir && mkdir CoRegFlux.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CoRegFlux.buildbin-libdir CoRegFlux_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CoRegFlux_1.0.0.zip && rm CoRegFlux_1.0.0.tar.gz CoRegFlux_1.0.0.zip
###
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100 4573k  100 4573k    0     0  34.6M      0 --:--:-- --:--:-- --:--:-- 36.0M

install for i386

* installing *source* package 'CoRegFlux' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CoRegFlux'
    finding HTML links ... done
    FBA_step                                html  
    ODCurveToFluxCurves                     html  
    ODCurveToMetabolicGeneCurves            html  
    ODToFluxBounds                          html  
    ODcurveToMetCurve                       html  
    ODtoflux                                html  
    PredictedGeneState                      html  
    SC_EXP_DATA                             html  
    SC_GRN_1                                html  
    SC_Test_data                            html  
    SC_experiment_influence                 html  
    Simulation                              html  
    Simulation_Step                         html  
    adjust_constraints_to_observed_rates    html  
    aliases_SC                              html  
    build_exchange_met                      html  
    continuous_gpr                          html  
    convert_metabolites_to_model_names      html  
    coregflux_static                        html  
    euler_step_biomass                      html  
    euler_step_metabolites                  html  
    get_biomass_flux_position               html  
    get_fba_fluxes_from_observations        html  
    get_fva_intervals_from_observations     html  
    get_linear_model                        html  
    get_metabolites_exchange_fluxes         html  
    gpr_expression                          html  
    iMM904                                  html  
    perturbation_function                   html  
    predict_linear_model_influence          html  
    train_continuous_model                  html  
    update_fluxes_constraints_GRegulation   html  
    update_fluxes_constraints_geneKOOV      html  
    update_fluxes_constraints_influence     html  
    update_fluxes_state                     html  
    update_system_state                     html  
    update_uptake_fluxes_constraints_metabolites
                                            html  
    visFluxCurves                           html  
    visMetabolicGeneCurves                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CoRegFlux' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CoRegFlux' as CoRegFlux_1.0.0.zip
* DONE (CoRegFlux)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CoRegFlux' successfully unpacked and MD5 sums checked