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INSTALL report for viper on tokay1

This page was generated on 2019-04-13 11:23:42 -0400 (Sat, 13 Apr 2019).

Package 1624/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
viper 1.16.0
Mariano J Alvarez
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/viper
Branch: RELEASE_3_8
Last Commit: c95d6fe
Last Changed Date: 2018-10-30 11:41:53 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  NA 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: viper
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/viper_1.16.0.tar.gz && rm -rf viper.buildbin-libdir && mkdir viper.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=viper.buildbin-libdir viper_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL viper_1.16.0.zip && rm viper_1.16.0.tar.gz viper_1.16.0.zip
StartedAt: 2019-04-12 19:00:05 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:00:49 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 44.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/viper_1.16.0.tar.gz && rm -rf viper.buildbin-libdir && mkdir viper.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=viper.buildbin-libdir viper_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL viper_1.16.0.zip && rm viper_1.16.0.tar.gz viper_1.16.0.zip
###
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install for i386

* installing *source* package 'viper' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'viper'
    finding HTML links ... done
    aREA                                    html  
    aecdf                                   html  
    approxk2d                               html  
    aracne2regulon                          html  
    aracne2regulon4cnv                      html  
    as.dist.signatureDistance               html  
    bootstrapTtest-methods                  html  
    bootstrapViper                          html  
    bootstrapmsviper                        html  
    comNames                                html  
    distMode                                html  
    fcvarna                                 html  
    filterCV-methods                        html  
    filterColMatrix                         html  
    filterRowMatrix                         html  
    frcv                                    html  
    frvarna                                 html  
    groupPwea3                              html  
    integrateSignatures                     html  
    ledge                                   html  
    loadExpset                              html  
    msviper-class                           html  
    msviper                                 html  
    msviperAnnot                            html  
    msviperClass                            html  
    msviperCombinatorial                    html  
    msviperSynergy                          html  
    plot.msviper                            html  
    pruneRegulon                            html  
    pwea3NULLf                              html  
    pwea3NULLgroups                         html  
    regulon-class                           html  
    rowTtest-methods                        html  
    scale.signatureDistance                 html  
    scaleGroups                             html  
    shadow                                  html  
    shadowRegulon                           html  
    sigT                                    html  
    signatureDistance-class                 html  
    signatureDistance                       html  
    summary.msviper                         html  
    ttestNull-methods                       html  
    viper                                   html  
    viperRPT                                html  
    viperSignature-class                    html  
    viperSignature-methods                  html  
    viperSimilarity                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'viper' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'viper' as viper_1.16.0.zip
* DONE (viper)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'viper' successfully unpacked and MD5 sums checked
In R CMD INSTALL