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INSTALL report for rTRM on tokay1

This page was generated on 2019-04-13 11:22:58 -0400 (Sat, 13 Apr 2019).

Package 1368/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rTRM 1.20.0
Diego Diez
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/rTRM
Branch: RELEASE_3_8
Last Commit: 2ee5bac
Last Changed Date: 2018-10-30 11:41:51 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: rTRM
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/rTRM_1.20.0.tar.gz && rm -rf rTRM.buildbin-libdir && mkdir rTRM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rTRM.buildbin-libdir rTRM_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL rTRM_1.20.0.zip && rm rTRM_1.20.0.tar.gz rTRM_1.20.0.zip
StartedAt: 2019-04-12 18:42:52 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 18:44:25 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 92.9 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/rTRM_1.20.0.tar.gz && rm -rf rTRM.buildbin-libdir && mkdir rTRM.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rTRM.buildbin-libdir rTRM_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL rTRM_1.20.0.zip && rm rTRM_1.20.0.tar.gz rTRM_1.20.0.zip
###
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100 2779k  100 2779k    0     0  38.4M      0 --:--:-- --:--:-- --:--:-- 40.5M

install for i386

* installing *source* package 'rTRM' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rTRM'
    finding HTML links ... done
    annotateFreq                            html  
    annotateModule                          html  
    annotateTRM                             html  
    biogrid_hs                              html  
    biogrid_mm                              html  
    findTRM                                 html  
    getAnnotations                          html  
    getBiogridData                          html  
    getConcentricList                       html  
    getLargestComp                          html  
    getMaps                                 html  
    getMatrices                             html  
    getMotifsFromEntrezgene                 html  
    getMotifsFromSymbol                     html  
    getOrthologFromMatrix                   html  
    getOrthologs                            html  
    getOrthologsFromBiomart                 html  
    getSequencesFromGenome                  html  
    getSimilarityMatrix                     html  
    getTFclass                              html  
    getTFclassFromEntrezgene                html  
    getTFterms                              html  
    initBiomart                             html  
    layout.arc                              html  
    layout.concentric                       html  
    plotDegree                              html  
    plotGraph                               html  
    plotTRM                                 html  
    plotTRMlegend                           html  
    processBiogrid                          html  
    rTRM-package                            html  
    removeVertices                          html  
    writeTRMreport                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'rTRM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rTRM' as rTRM_1.20.0.zip
* DONE (rTRM)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'rTRM' successfully unpacked and MD5 sums checked
In R CMD INSTALL