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INSTALL report for pgca on tokay1

This page was generated on 2019-04-13 11:27:50 -0400 (Sat, 13 Apr 2019).

Package 1146/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pgca 1.6.1
Gabriela Cohen-Freue
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/pgca
Branch: RELEASE_3_8
Last Commit: 96b7ad9
Last Changed Date: 2019-01-04 13:06:32 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: pgca
Version: 1.6.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/pgca_1.6.1.tar.gz && rm -rf pgca.buildbin-libdir && mkdir pgca.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pgca.buildbin-libdir pgca_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL pgca_1.6.1.zip && rm pgca_1.6.1.tar.gz pgca_1.6.1.zip
StartedAt: 2019-04-12 19:15:40 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:16:02 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 21.8 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/pgca_1.6.1.tar.gz && rm -rf pgca.buildbin-libdir && mkdir pgca.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pgca.buildbin-libdir pgca_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL pgca_1.6.1.zip && rm pgca_1.6.1.tar.gz pgca_1.6.1.zip
###
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install for i386

* installing *source* package 'pgca' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'pgca'
    finding HTML links ... done
    BET1947_v339                            html  
    applyDict                               html  
    pgcaDict                                html  
    saveDict                                html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpWAYimv/R.INSTALLe2462f242c0/pgca/man/saveDict.Rd:13: file link 'connection' in package 'base' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'pgca' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pgca' as pgca_1.6.1.zip
* DONE (pgca)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'pgca' successfully unpacked and MD5 sums checked
In R CMD INSTALL