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INSTALL report for pcaExplorer on tokay1

This page was generated on 2019-04-13 11:26:37 -0400 (Sat, 13 Apr 2019).

Package 1132/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pcaExplorer 2.8.1
Federico Marini
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/pcaExplorer
Branch: RELEASE_3_8
Last Commit: 7d38a3c
Last Changed Date: 2019-01-04 13:15:49 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: pcaExplorer
Version: 2.8.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/pcaExplorer_2.8.1.tar.gz && rm -rf pcaExplorer.buildbin-libdir && mkdir pcaExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pcaExplorer.buildbin-libdir pcaExplorer_2.8.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL pcaExplorer_2.8.1.zip && rm pcaExplorer_2.8.1.tar.gz pcaExplorer_2.8.1.zip
StartedAt: 2019-04-12 20:31:19 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:32:30 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 71.3 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/pcaExplorer_2.8.1.tar.gz && rm -rf pcaExplorer.buildbin-libdir && mkdir pcaExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pcaExplorer.buildbin-libdir pcaExplorer_2.8.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL pcaExplorer_2.8.1.zip && rm pcaExplorer_2.8.1.tar.gz pcaExplorer_2.8.1.zip
###
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100 8717k  100 8717k    0     0  64.6M      0 --:--:-- --:--:-- --:--:-- 66.5M

install for i386

* installing *source* package 'pcaExplorer' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'pcaExplorer'
    finding HTML links ... done
    correlatePCs                            html  
    distro_expr                             html  
    finding level-2 HTML links ... done

    geneprofiler                            html  
    genespca                                html  
    get_annotation                          html  
    get_annotation_orgdb                    html  
    hi_loadings                             html  
    limmaquickpca2go                        html  
    makeExampleDESeqDataSet_multifac        html  
    pair_corr                               html  
    pca2go                                  html  
    pcaExplorer-pkg                         html  
    pcaExplorer                             html  
    pcaplot                                 html  
    pcaplot3d                               html  
    pcascree                                html  
    plotPCcorrs                             html  
    topGOtable                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'pcaExplorer' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pcaExplorer' as pcaExplorer_2.8.1.zip
* DONE (pcaExplorer)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'pcaExplorer' successfully unpacked and MD5 sums checked
In R CMD INSTALL