Back to Multiple platform build/check report for BioC 3.8
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

INSTALL report for netSmooth on tokay1

This page was generated on 2019-04-13 11:29:19 -0400 (Sat, 13 Apr 2019).

Package 1054/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netSmooth 1.2.0
Jonathan Ronen
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/netSmooth
Branch: RELEASE_3_8
Last Commit: ba2d3b4
Last Changed Date: 2019-01-09 09:30:20 -0400 (Wed, 09 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  ERROR  ERROR  skipped  skipped 

Summary

Package: netSmooth
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/netSmooth_1.2.0.tar.gz && rm -rf netSmooth.buildbin-libdir && mkdir netSmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netSmooth.buildbin-libdir netSmooth_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL netSmooth_1.2.0.zip && rm netSmooth_1.2.0.tar.gz netSmooth_1.2.0.zip
StartedAt: 2019-04-12 20:34:17 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:35:28 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 71.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/netSmooth_1.2.0.tar.gz && rm -rf netSmooth.buildbin-libdir && mkdir netSmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netSmooth.buildbin-libdir netSmooth_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL netSmooth_1.2.0.zip && rm netSmooth_1.2.0.tar.gz netSmooth_1.2.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2969k  100 2969k    0     0  23.5M      0 --:--:-- --:--:-- --:--:-- 24.1M

install for i386

* installing *source* package 'netSmooth' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'netSmooth'
    finding HTML links ... done
    calc2DEntropy                           html  
    clusterExperimentWorkflow               html  
    clusterOne                              html  
    dimReduce                               html  
    human.ppi                               html  
    l1NormalizeColumns                      html  
    l1NormalizeRows                         html  
    mouse.ppi                               html  
    netSmooth                               html  
    pickDimReduction                        html  
    projectFromNetworkRecombine-matrix-method
                                            html  
    projectOnNetwork                        html  
    randomWalkByIterations                  html  
    randomWalkByMatrixInv-matrix-method     html  
    randomWalkBySolve-matrix-method         html  
    robustClusters                          html  
    scoreSmoothing                          html  
    smallPPI                                html  
    smallscRNAseq                           html  
    smoothAndRecombine-matrix-method        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'netSmooth' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'netSmooth' as netSmooth_1.2.0.zip
* DONE (netSmooth)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'netSmooth' successfully unpacked and MD5 sums checked
In R CMD INSTALL