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BUILD BIN report for netReg on tokay1

This page was generated on 2019-04-13 11:27:41 -0400 (Sat, 13 Apr 2019).

Package 1051/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netReg 1.6.0
Simon Dirmeier
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/netReg
Branch: RELEASE_3_8
Last Commit: 5019b18
Last Changed Date: 2018-10-30 11:42:04 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: netReg
Version: 1.6.0
Command: rm -rf netReg.buildbin-libdir && mkdir netReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netReg.buildbin-libdir netReg_1.6.0.tar.gz
StartedAt: 2019-04-13 07:42:09 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:45:48 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 218.8 seconds
RetCode: 0
Status:  OK  
PackageFile: netReg_1.6.0.zip
PackageFileSize: 3.952 MiB

Command output

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###
### Running command:
###
###   rm -rf netReg.buildbin-libdir && mkdir netReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netReg.buildbin-libdir netReg_1.6.0.tar.gz
###
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install for i386

* installing *source* package 'netReg' ...
** libs
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c cv_set.cpp -o cv_set.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c data_factory.cpp -o data_factory.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c edgenet.cpp -o edgenet.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c edgenet_model_selection.cpp -o edgenet_model_selection.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c edgenet_wrapper.cpp -o edgenet_wrapper.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c graph_functions.cpp -o graph_functions.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c graph_model_cv_data.cpp -o graph_model_cv_data.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c netReg_wrapper.cpp -o netReg_wrapper.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c stat_functions.cpp -o stat_functions.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c vector_functions.cpp -o vector_functions.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o netReg.dll tmp.def cv_set.o data_factory.o edgenet.o edgenet_model_selection.o edgenet_wrapper.o graph_functions.o graph_model_cv_data.o netReg_wrapper.o stat_functions.o vector_functions.o -fopenmp -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/netReg.buildbin-libdir/netReg/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'netReg'
    finding HTML links ... done
    cv.edgenet                              html  
    edgenet                                 html  
    netReg-package                          html  
    predict.gaussian.edgenet                html  
    yeast                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'netReg' ...
** libs
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c cv_set.cpp -o cv_set.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c data_factory.cpp -o data_factory.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c edgenet.cpp -o edgenet.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c edgenet_model_selection.cpp -o edgenet_model_selection.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c edgenet_wrapper.cpp -o edgenet_wrapper.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c graph_functions.cpp -o graph_functions.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c graph_model_cv_data.cpp -o graph_model_cv_data.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c netReg_wrapper.cpp -o netReg_wrapper.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c stat_functions.cpp -o stat_functions.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"  -I. -fopenmp   -O2 -Wall  -mtune=generic -c vector_functions.cpp -o vector_functions.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o netReg.dll tmp.def cv_set.o data_factory.o edgenet.o edgenet_model_selection.o edgenet_wrapper.o graph_functions.o graph_model_cv_data.o netReg_wrapper.o stat_functions.o vector_functions.o -fopenmp -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lRlapack -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/netReg.buildbin-libdir/netReg/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'netReg' as netReg_1.6.0.zip
* DONE (netReg)
In R CMD INSTALL
In R CMD INSTALL