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INSTALL report for mfa on tokay1

This page was generated on 2019-04-13 11:27:57 -0400 (Sat, 13 Apr 2019).

Package 948/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mfa 1.4.1
Kieran Campbell
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/mfa
Branch: RELEASE_3_8
Last Commit: 0b6807a
Last Changed Date: 2019-01-04 13:39:15 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mfa
Version: 1.4.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/mfa_1.4.1.tar.gz && rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mfa.buildbin-libdir mfa_1.4.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL mfa_1.4.1.zip && rm mfa_1.4.1.tar.gz mfa_1.4.1.zip
StartedAt: 2019-04-12 18:52:34 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 18:53:45 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 70.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/mfa_1.4.1.tar.gz && rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mfa.buildbin-libdir mfa_1.4.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL mfa_1.4.1.zip && rm mfa_1.4.1.tar.gz mfa_1.4.1.zip
###
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install for i386

* installing *source* package 'mfa' ...
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c gibbs.cpp -o gibbs.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o mfa.dll tmp.def RcppExports.o gibbs.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/mfa.buildbin-libdir/mfa/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'mfa'
    finding HTML links ... done
    calculate_chi                           html  
    create_synthetic                        html  
    cs_sigmoid                              html  
    empirical_lambda                        html  
    log_sum_exp                             html  
    map_branch                              html  
    mcmcify                                 html  
    mfa                                     html  
    plot_chi                                html  
    plot_dropout_relationship               html  
    plot_mfa_autocorr                       html  
    plot_mfa_trace                          html  
    posterior                               html  
    print.mfa                               html  
    summary.mfa                             html  
    to_ggmcmc                               html  
    transient                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'mfa' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.8-bioc/R/library/Rcpp/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c gibbs.cpp -o gibbs.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o mfa.dll tmp.def RcppExports.o gibbs.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/mfa.buildbin-libdir/mfa/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mfa' as mfa_1.4.1.zip
* DONE (mfa)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'mfa' successfully unpacked and MD5 sums checked
In R CMD INSTALL