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INSTALL report for loci2path on tokay1

This page was generated on 2019-04-13 11:28:38 -0400 (Sat, 13 Apr 2019).

Package 841/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
loci2path 1.2.0
Tianlei Xu
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/loci2path
Branch: RELEASE_3_8
Last Commit: 582bc31
Last Changed Date: 2018-10-30 11:42:07 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: loci2path
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/loci2path_1.2.0.tar.gz && rm -rf loci2path.buildbin-libdir && mkdir loci2path.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=loci2path.buildbin-libdir loci2path_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL loci2path_1.2.0.zip && rm loci2path_1.2.0.tar.gz loci2path_1.2.0.zip
StartedAt: 2019-04-12 19:35:56 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:36:37 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 41.3 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/loci2path_1.2.0.tar.gz && rm -rf loci2path.buildbin-libdir && mkdir loci2path.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=loci2path.buildbin-libdir loci2path_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL loci2path_1.2.0.zip && rm loci2path_1.2.0.tar.gz loci2path_1.2.0.zip
###
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install for i386

* installing *source* package 'loci2path' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'loci2path'
    finding HTML links ... done
    biocarta                                html  
    check.geneid                            html  
    eqtlSet-class                           html  
    eset.list                               html  
    geneSet-class                           html  
    getHeatmap-methods                      html  
    getMat-methods                          html  
    getPathDescription-methods              html  
    getPval-methods                         html  
    getTissueDegree-methods                 html  
    getWordcloud-methods                    html  
    loci2pathResult-class                   html  
    query-methods                           html  
    query.gr                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'loci2path' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'loci2path' as loci2path_1.2.0.zip
* DONE (loci2path)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'loci2path' successfully unpacked and MD5 sums checked
In R CMD INSTALL