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INSTALL report for ldblock on tokay1

This page was generated on 2019-04-13 11:25:51 -0400 (Sat, 13 Apr 2019).

Package 826/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ldblock 1.12.1
VJ Carey
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/ldblock
Branch: RELEASE_3_8
Last Commit: 0d7c6a0
Last Changed Date: 2019-04-03 12:24:27 -0400 (Wed, 03 Apr 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ldblock
Version: 1.12.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/ldblock_1.12.1.tar.gz && rm -rf ldblock.buildbin-libdir && mkdir ldblock.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ldblock.buildbin-libdir ldblock_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL ldblock_1.12.1.zip && rm ldblock_1.12.1.tar.gz ldblock_1.12.1.zip
StartedAt: 2019-04-12 20:19:45 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:20:55 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 69.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/ldblock_1.12.1.tar.gz && rm -rf ldblock.buildbin-libdir && mkdir ldblock.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ldblock.buildbin-libdir ldblock_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL ldblock_1.12.1.zip && rm ldblock_1.12.1.tar.gz ldblock_1.12.1.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 39.5M  100 39.5M    0     0  79.2M      0 --:--:-- --:--:-- --:--:-- 79.8M

install for i386

* installing *source* package 'ldblock' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ldblock'
    finding HTML links ... done
    downloadPopByChr                        html  
    expandSnpSet                            html  
    hmld                                    html  
    ldByGene                                html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpuWjJjR/R.INSTALLef03802358e/ldblock/man/ldByGene.Rd:33: file link 'readVcf' in package 'VariantAnnotation' does not exist and so has been treated as a topic
    ldblock-package                         html  
    ldstruct-class                          html  
    s3_1kg                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'ldblock' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ldblock' as ldblock_1.12.1.zip
* DONE (ldblock)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'ldblock' successfully unpacked and MD5 sums checked
In R CMD INSTALL