Back to Multiple platform build/check report for BioC 3.8
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

INSTALL report for illuminaio on tokay1

This page was generated on 2019-04-13 11:22:28 -0400 (Sat, 13 Apr 2019).

Package 764/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
illuminaio 0.24.0
Kasper Daniel Hansen
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/illuminaio
Branch: RELEASE_3_8
Last Commit: 47953c7
Last Changed Date: 2018-10-30 11:41:50 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: illuminaio
Version: 0.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/illuminaio_0.24.0.tar.gz && rm -rf illuminaio.buildbin-libdir && mkdir illuminaio.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=illuminaio.buildbin-libdir illuminaio_0.24.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL illuminaio_0.24.0.zip && rm illuminaio_0.24.0.tar.gz illuminaio_0.24.0.zip
StartedAt: 2019-04-12 18:23:45 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 18:25:28 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 102.5 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/illuminaio_0.24.0.tar.gz && rm -rf illuminaio.buildbin-libdir && mkdir illuminaio.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=illuminaio.buildbin-libdir illuminaio_0.24.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL illuminaio_0.24.0.zip && rm illuminaio_0.24.0.tar.gz illuminaio_0.24.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 30257  100 30257    0     0   613k      0 --:--:-- --:--:-- --:--:--  671k

install for i386

* installing *source* package 'illuminaio' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c 000.init.c -o 000.init.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c des.c -o des.o
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c local_des.c -o local_des.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o illuminaio.dll tmp.def 000.init.o des.o local_des.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/illuminaio.buildbin-libdir/illuminaio/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'illuminaio'
    finding HTML links ... done
    readBGX                                 html  
    readBPM                                 html  
    readIDAT                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'illuminaio' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c 000.init.c -o 000.init.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c des.c -o des.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c local_des.c -o local_des.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o illuminaio.dll tmp.def 000.init.o des.o local_des.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/illuminaio.buildbin-libdir/illuminaio/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'illuminaio' as illuminaio_0.24.0.zip
* DONE (illuminaio)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'illuminaio' successfully unpacked and MD5 sums checked
In R CMD INSTALL