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INSTALL report for TxRegInfra on tokay1

This page was generated on 2019-04-13 11:29:18 -0400 (Sat, 13 Apr 2019).

Package 1606/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TxRegInfra 1.2.1
VJ Carey
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/TxRegInfra
Branch: RELEASE_3_8
Last Commit: 2028a2f
Last Changed Date: 2019-03-08 09:07:00 -0400 (Fri, 08 Mar 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  NA 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TxRegInfra
Version: 1.2.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/TxRegInfra_1.2.1.tar.gz && rm -rf TxRegInfra.buildbin-libdir && mkdir TxRegInfra.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TxRegInfra.buildbin-libdir TxRegInfra_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL TxRegInfra_1.2.1.zip && rm TxRegInfra_1.2.1.tar.gz TxRegInfra_1.2.1.zip
StartedAt: 2019-04-12 19:50:16 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:52:20 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 124.1 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/TxRegInfra_1.2.1.tar.gz && rm -rf TxRegInfra.buildbin-libdir && mkdir TxRegInfra.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TxRegInfra.buildbin-libdir TxRegInfra_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL TxRegInfra_1.2.1.zip && rm TxRegInfra_1.2.1.tar.gz TxRegInfra_1.2.1.zip
###
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install for i386

* installing *source* package 'TxRegInfra' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TxRegInfra'
    finding HTML links ... done
    RaggedMongoExpt                         html  
    URL_txregInAWS                          html  
    URL_txregLocal                          html  
    basicColData                            html  
    basicFormatter                          html  
    dgf_meta                                html  
    getDocumentFields                       html  
    getFieldNames                           html  
    grConverter                             html  
    importBedToMongo                        html  
    listAllCollections                      html  
    makeAggregator                          html  
    makeColData                             html  
    makeGRConverterList                     html  
    ragged41FP                              html  
    sbov                                    html  
    txmodels                                html  
    txregCollections                        html  
    verifyHasMongoCmd                       html  
    verifyRunningMongodb                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'TxRegInfra' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TxRegInfra' as TxRegInfra_1.2.1.zip
* DONE (TxRegInfra)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'TxRegInfra' successfully unpacked and MD5 sums checked
In R CMD INSTALL