Mark Robinson
| Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019) |
| URL: https://git.bioconductor.org/packages/Repitools |
| Branch: RELEASE_3_8 |
| Last Commit: 7aac8b7 |
| Last Changed Date: 2018-10-30 11:41:47 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-16 11:55:36 -0400 (Tue, 16 Apr 2019).
| Package 1290/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Repitools 1.28.0 Mark Robinson
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | [ OK ] | |
| Package: Repitools |
| Version: 1.28.0 |
| Command: rm -rf Repitools.buildbin-libdir && mkdir Repitools.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Repitools_1.28.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R Repitools.buildbin-libdir |
| StartedAt: 2019-04-16 04:38:01 -0400 (Tue, 16 Apr 2019) |
| EndedAt: 2019-04-16 04:38:37 -0400 (Tue, 16 Apr 2019) |
| EllapsedTime: 36.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: Repitools_1.28.0.tgz |
| PackageFileSize: 2.296 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Repitools.buildbin-libdir && mkdir Repitools.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh Repitools_1.28.0.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R Repitools.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=Repitools.buildbin-libdir Repitools_1.28.0.tar.gz' >>>>>>> * installing *source* package ‘Repitools’ ... ** libs clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -D R_NO_REMAP -I. -fPIC -Wall -g -O2 -c const.c -o const.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -D R_NO_REMAP -I. -fPIC -Wall -g -O2 -c hyp2f1.c -o hyp2f1.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -D R_NO_REMAP -I. -fPIC -Wall -g -O2 -c mtherr.c -o mtherr.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o Repitools.so const.o hyp2f1.o mtherr.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.8-bioc/meat/Repitools.buildbin-libdir/Repitools/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Repitools) >>>>>>> >>>>>>> FIXING LINKS FOR Repitools.buildbin-libdir/Repitools/libs//Repitools.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgcc_s.1.dylib" "Repitools.buildbin-libdir/Repitools/libs//Repitools.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libgfortran.3.dylib" "Repitools.buildbin-libdir/Repitools/libs//Repitools.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.5.2.dylib" "Repitools.buildbin-libdir/Repitools/libs//Repitools.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libreadline.dylib" "Repitools.buildbin-libdir/Repitools/libs//Repitools.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libquadmath.0.dylib" "Repitools.buildbin-libdir/Repitools/libs//Repitools.so"