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INSTALL report for NormqPCR on tokay1

This page was generated on 2019-04-13 11:21:43 -0400 (Sat, 13 Apr 2019).

Package 1062/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NormqPCR 1.28.0
James Perkins
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/NormqPCR
Branch: RELEASE_3_8
Last Commit: 562ece9
Last Changed Date: 2018-10-30 11:41:47 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: NormqPCR
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/NormqPCR_1.28.0.tar.gz && rm -rf NormqPCR.buildbin-libdir && mkdir NormqPCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NormqPCR.buildbin-libdir NormqPCR_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL NormqPCR_1.28.0.zip && rm NormqPCR_1.28.0.tar.gz NormqPCR_1.28.0.zip
StartedAt: 2019-04-12 19:00:24 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:01:08 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 43.4 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/NormqPCR_1.28.0.tar.gz && rm -rf NormqPCR.buildbin-libdir && mkdir NormqPCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NormqPCR.buildbin-libdir NormqPCR_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL NormqPCR_1.28.0.zip && rm NormqPCR_1.28.0.tar.gz NormqPCR_1.28.0.zip
###
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install for i386

* installing *source* package 'NormqPCR' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NormqPCR'
    finding HTML links ... done
    Bladder                                 html  
    BladderRepro                            html  
    Colon                                   html  
    ComputeNRQs                             html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpW4ygjE/R.INSTALLf809434e8f/NormqPCR/man/ComputeNRQs.Rd:14: file link 'qPCRBatch' in package 'ReadqPCR' does not exist and so has been treated as a topic
    CqValues                                html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpW4ygjE/R.INSTALLf809434e8f/NormqPCR/man/CqValues.Rd:23: file link 'CyclesSet' in package 'ReadqPCR' does not exist and so has been treated as a topic
    NormqPCR-package                        html  
    combineTechReps                         html  
    combineTechRepsSD                       html  
    deltaCt                                 html  
    deltaDeltaCt                            html  
    geNorm                                  html  
    geomMean                                html  
    makeAllNAs                              html  
    makeAllNewVal                           html  
    replaceAboveCutOff                      html  
    replaceNAs                              html  
    selectHKs                               html  
    stabMeasureM                            html  
    stabMeasureRho                          html  
** building package indices
** installing vignettes
   'NormqPCR.Rnw' 
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'NormqPCR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NormqPCR' as NormqPCR_1.28.0.zip
* DONE (NormqPCR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'NormqPCR' successfully unpacked and MD5 sums checked
In R CMD INSTALL