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INSTALL report for MSGFplus on tokay1

This page was generated on 2019-04-13 11:24:24 -0400 (Sat, 13 Apr 2019).

Package 1007/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSGFplus 1.16.1
Thomas Lin Pedersen
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/MSGFplus
Branch: RELEASE_3_8
Last Commit: 62a4a5d
Last Changed Date: 2019-01-04 13:40:39 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: MSGFplus
Version: 1.16.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/MSGFplus_1.16.1.tar.gz && rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSGFplus.buildbin-libdir MSGFplus_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL MSGFplus_1.16.1.zip && rm MSGFplus_1.16.1.tar.gz MSGFplus_1.16.1.zip
StartedAt: 2019-04-12 18:28:31 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 18:34:34 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 362.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/MSGFplus_1.16.1.tar.gz && rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSGFplus.buildbin-libdir MSGFplus_1.16.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL MSGFplus_1.16.1.zip && rm MSGFplus_1.16.1.tar.gz MSGFplus_1.16.1.zip
###
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install for i386

* installing *source* package 'MSGFplus' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSGFplus'
    finding HTML links ... done
    MSGFplus-package                        html  
    chargeRange                             html  
    db                                      html  
    enzyme                                  html  
    fragmentation                           html  
    getMSGFpar                              html  
    instrument                              html  
    isotopeError                            html  
    lengthRange                             html  
    matches                                 html  
    mods                                    html  
    msgfAsync-class                         html  
    msgfPar-class                           html  
    msgfPar                                 html  
    msgfParChargeRange-class                html  
    msgfParEnzyme-class                     html  
    msgfParFragmentation-class              html  
    msgfParFromID                           html  
    msgfParGUI                              html  
    msgfParInstrument-class                 html  
    msgfParIsotopeError-class               html  
    msgfParLengthRange-class                html  
    msgfParMatches-class                    html  
    msgfParModification-class               html  
    msgfParModificationList-class           html  
    msgfParNtt-class                        html  
    msgfParProtocol-class                   html  
    msgfParTda-class                        html  
    msgfParTolerance-class                  html  
    ntt                                     html  
    protocol                                html  
    runMSGF                                 html  
    tda                                     html  
    tolerance                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'MSGFplus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSGFplus' as MSGFplus_1.16.1.zip
* DONE (MSGFplus)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'MSGFplus' successfully unpacked and MD5 sums checked
In R CMD INSTALL