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INSTALL report for GenomeGraphs on tokay1

This page was generated on 2019-04-13 11:20:40 -0400 (Sat, 13 Apr 2019).

Package 619/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GenomeGraphs 1.42.0
Steffen Durinck
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/GenomeGraphs
Branch: RELEASE_3_8
Last Commit: c8c01b5
Last Changed Date: 2018-10-30 11:41:44 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GenomeGraphs
Version: 1.42.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/GenomeGraphs_1.42.0.tar.gz && rm -rf GenomeGraphs.buildbin-libdir && mkdir GenomeGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeGraphs.buildbin-libdir GenomeGraphs_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL GenomeGraphs_1.42.0.zip && rm GenomeGraphs_1.42.0.tar.gz GenomeGraphs_1.42.0.zip
StartedAt: 2019-04-12 19:27:44 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:29:14 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 90.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/GenomeGraphs_1.42.0.tar.gz && rm -rf GenomeGraphs.buildbin-libdir && mkdir GenomeGraphs.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomeGraphs.buildbin-libdir GenomeGraphs_1.42.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL GenomeGraphs_1.42.0.zip && rm GenomeGraphs_1.42.0.tar.gz GenomeGraphs_1.42.0.zip
###
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install for i386

* installing *source* package 'GenomeGraphs' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GenomeGraphs'
    finding HTML links ... done
    AnnotationTrack-class                   html  
    BaseTrack-class                         html  
    DisplayPars-class                       html  
    DisplayPars                             html  
    ExonArray-class                         html  
    Gene-class                              html  
    GeneModel-class                         html  
    GeneRegion-class                        html  
    GenericArray-class                      html  
    GenomeAxis-class                        html  
    HighlightRegion-class                   html  
    Ideogram-class                          html  
    ImplementsTrackOverlay-class            html  
    Legend-class                            html  
    MappedRead-class                        html  
    Overlay-class                           html  
    RectangleOverlay-class                  html  
    Segmentation-class                      html  
    Smoothing-class                         html  
    TextOverlay-class                       html  
    Title-class                             html  
    TrackOverlay-class                      html  
    Transcript-class                        html  
    TranscriptRegion-class                  html  
    cn                                      html  
    drawGD                                  html  
    drawTrackOverlay-methods                html  
    exonProbePos                            html  
    gdObject-class                          html  
    gdPlot                                  html  
    geneBiomart                             html  
    geneRegionBiomart                       html  
    getGenomicRange                         html  
    getPar                                  html  
    getSize                                 html  
    ideogramTab                             html  
    intensity                               html  
    makeAnnotationTrack                     html  
    makeBaseTrack                           html  
    makeExonArray                           html  
    makeGene                                html  
    makeGeneModel                           html  
    makeGeneRegion                          html  
    makeGenericArray                        html  
    makeGenomeAxis                          html  
    makeIdeogram                            html  
    makeLegend                              html  
    makeRectangleOverlay                    html  
    makeSegmentation                        html  
    makeSmoothing                           html  
    makeTextOverlay                         html  
    makeTitle                               html  
    makeTranscript                          html  
    probestart                              html  
    segEnd                                  html  
    segStart                                html  
    segments                                html  
    seqDataEx                               html  
    setPar                                  html  
    showDisplayOptions                      html  
    unrData                                 html  
    unrNProbes                              html  
    unrPositions                            html  
    yeastCons1                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'GenomeGraphs' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GenomeGraphs' as GenomeGraphs_1.42.0.zip
* DONE (GenomeGraphs)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'GenomeGraphs' successfully unpacked and MD5 sums checked
In R CMD INSTALL