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BUILD BIN report for GSReg on tokay1

This page was generated on 2019-04-13 11:24:04 -0400 (Sat, 13 Apr 2019).

Package 695/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GSReg 1.16.0
Bahman Afsari , Elana J. Fertig
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/GSReg
Branch: RELEASE_3_8
Last Commit: 1286f6e
Last Changed Date: 2018-10-30 11:41:54 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: GSReg
Version: 1.16.0
Command: rm -rf GSReg.buildbin-libdir && mkdir GSReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GSReg.buildbin-libdir GSReg_1.16.0.tar.gz
StartedAt: 2019-04-13 07:23:15 -0400 (Sat, 13 Apr 2019)
EndedAt: 2019-04-13 07:24:49 -0400 (Sat, 13 Apr 2019)
EllapsedTime: 93.6 seconds
RetCode: 0
Status:  OK  
PackageFile: GSReg_1.16.0.zip
PackageFileSize: 378.1 KiB

Command output

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### Running command:
###
###   rm -rf GSReg.buildbin-libdir && mkdir GSReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GSReg.buildbin-libdir GSReg_1.16.0.tar.gz
###
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install for i386

* installing *source* package 'GSReg' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c kendallTauDistance.cc -o kendallTauDistance.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c kendallTauDistanceFromTemp.cc -o kendallTauDistanceFromTemp.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c kendallTauDistanceRestricted.cc -o kendallTauDistanceRestricted.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nij.cc -o nij.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c vect2compC.cc -o vect2compC.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o GSReg.dll tmp.def init.o kendallTauDistance.o kendallTauDistanceFromTemp.o kendallTauDistanceRestricted.o nij.o vect2compC.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/GSReg.buildbin-libdir/GSReg/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GSReg'
    finding HTML links ... done
    GSReg-package                           html  
    GSReg_GeneSets_DIRAC                    html  
    GSReg_GeneSets_VReg.                    html  
    GSReg_Kendall                           html  
    GSReg_OverlapJunction                   html  
    GSReg_SEVA                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'GSReg' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c init.c -o init.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c kendallTauDistance.cc -o kendallTauDistance.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c kendallTauDistanceFromTemp.cc -o kendallTauDistanceFromTemp.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c kendallTauDistanceRestricted.cc -o kendallTauDistanceRestricted.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nij.cc -o nij.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c vect2compC.cc -o vect2compC.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o GSReg.dll tmp.def init.o kendallTauDistance.o kendallTauDistanceFromTemp.o kendallTauDistanceRestricted.o nij.o vect2compC.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.8-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.8-bioc/meat/GSReg.buildbin-libdir/GSReg/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GSReg' as GSReg_1.16.0.zip
* DONE (GSReg)
In R CMD INSTALL
In R CMD INSTALL