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INSTALL report for GOstats on tokay1

This page was generated on 2019-04-13 11:19:26 -0400 (Sat, 13 Apr 2019).

Package 669/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOstats 2.48.0
Bioconductor Package Maintainer
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/GOstats
Branch: RELEASE_3_8
Last Commit: 5db7020
Last Changed Date: 2018-10-30 11:41:41 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: GOstats
Version: 2.48.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/GOstats_2.48.0.tar.gz && rm -rf GOstats.buildbin-libdir && mkdir GOstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOstats.buildbin-libdir GOstats_2.48.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL GOstats_2.48.0.zip && rm GOstats_2.48.0.tar.gz GOstats_2.48.0.zip
StartedAt: 2019-04-12 19:28:57 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:29:44 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 46.9 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/GOstats_2.48.0.tar.gz && rm -rf GOstats.buildbin-libdir && mkdir GOstats.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOstats.buildbin-libdir GOstats_2.48.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL GOstats_2.48.0.zip && rm GOstats_2.48.0.tar.gz GOstats_2.48.0.zip
###
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100 1570k  100 1570k    0     0  14.2M      0 --:--:-- --:--:-- --:--:-- 14.7M

install for i386

* installing *source* package 'GOstats' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GOstats'
    finding HTML links ... done
    GOHyperGResult-class                    html  
    GOstats-defunct                         html  
    GOstats-package                         html  
    Ndists                                  html  
    OBOHyperGResult-class                   html  
    compCorrGraph                           html  
    compGdist                               html  
    hyperGTest                              html  
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpWUPn2u/R.INSTALL14b030777fb8/GOstats/man/hyperGTest.Rd:47: file link 'geneGoHyperGeoTest' in package 'Category' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.8-bioc/tmpdir/RtmpWUPn2u/R.INSTALL14b030777fb8/GOstats/man/hyperGTest.Rd:48: file link 'geneKeggHyperGeoTest' in package 'Category' does not exist and so has been treated as a topic
    idx2dimnames                            html  
    makeGOGraph                             html  
    notConn                                 html  
    oneGOGraph                              html  
    probeSetSummary                         html  
    shortestPath                            html  
    simLL                                   html  
    termGraphs                              html  
    triadCensus                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'GOstats' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GOstats' as GOstats_2.48.0.zip
* DONE (GOstats)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'GOstats' successfully unpacked and MD5 sums checked
In R CMD INSTALL