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INSTALL report for FourCSeq on tokay1

This page was generated on 2019-04-13 11:24:16 -0400 (Sat, 13 Apr 2019).

Package 558/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FourCSeq 1.16.0
Felix A. Klein
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/FourCSeq
Branch: RELEASE_3_8
Last Commit: 2484619
Last Changed Date: 2018-10-30 11:41:55 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: FourCSeq
Version: 1.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/FourCSeq_1.16.0.tar.gz && rm -rf FourCSeq.buildbin-libdir && mkdir FourCSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FourCSeq.buildbin-libdir FourCSeq_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL FourCSeq_1.16.0.zip && rm FourCSeq_1.16.0.tar.gz FourCSeq_1.16.0.zip
StartedAt: 2019-04-12 20:15:55 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:17:07 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 72.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/FourCSeq_1.16.0.tar.gz && rm -rf FourCSeq.buildbin-libdir && mkdir FourCSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FourCSeq.buildbin-libdir FourCSeq_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL FourCSeq_1.16.0.zip && rm FourCSeq_1.16.0.tar.gz FourCSeq_1.16.0.zip
###
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install for i386

* installing *source* package 'FourCSeq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible 
** help
*** installing help indices
  converting help for package 'FourCSeq'
    finding HTML links ... done
    FourC                                   html  
    addFragments                            html  
    addPeaks                                html  
    addViewpointFrags                       html  
    combineFragEnds                         html  
    countFragmentOverlaps                   html  
    countFragmentOverlapsSecondCutter       html  
    distFitMonotone                         html  
    distFitMonotoneSymmetric                html  
    fc                                      html  
    fcf                                     html  
    findViewpointFragments                  html  
    getAllResults                           html  
    getDifferences                          html  
    getDistAroundVp                         html  
    getNormalizationFactors                 html  
    getReferenceSeq                         html  
    getZScores                              html  
    normalizeRPM                            html  
    plotDifferences                         html  
    plotFits                                html  
    plotNormalizationFactors                html  
    plotScatter                             html  
    plotZScores                             html  
    smoothCounts                            html  
    smoothHitPerCent                        html  
    writeTrackFiles                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'FourCSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'FourCSeq' as FourCSeq_1.16.0.zip
* DONE (FourCSeq)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'FourCSeq' successfully unpacked and MD5 sums checked
In R CMD INSTALL