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INSTALL report for EDASeq on tokay1

This page was generated on 2019-04-13 11:21:50 -0400 (Sat, 13 Apr 2019).

Package 455/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.16.3
Davide Risso
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/EDASeq
Branch: RELEASE_3_8
Last Commit: abf1b7c
Last Changed Date: 2019-01-10 04:12:55 -0400 (Thu, 10 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: EDASeq
Version: 2.16.3
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/EDASeq_2.16.3.tar.gz && rm -rf EDASeq.buildbin-libdir && mkdir EDASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDASeq.buildbin-libdir EDASeq_2.16.3.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL EDASeq_2.16.3.zip && rm EDASeq_2.16.3.tar.gz EDASeq_2.16.3.zip
StartedAt: 2019-04-12 19:55:12 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:56:26 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 73.2 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/EDASeq_2.16.3.tar.gz && rm -rf EDASeq.buildbin-libdir && mkdir EDASeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EDASeq.buildbin-libdir EDASeq_2.16.3.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL EDASeq_2.16.3.zip && rm EDASeq_2.16.3.tar.gz EDASeq_2.16.3.zip
###
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install for i386

* installing *source* package 'EDASeq' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EDASeq'
    finding HTML links ... done
    EDASeq-package                          html  
    finding level-2 HTML links ... done

    MDPlot-methods                          html  
    SeqExpressionSet-class                  html  
    barplot-methods                         html  
    betweenLaneNormalization-methods        html  
    biasBoxplot-methods                     html  
    biasPlot-methods                        html  
    boxplot-methods                         html  
    getGeneLengthAndGCContent               html  
    meanVarPlot-methods                     html  
    newSeqExpressionSet                     html  
    plot-methods                            html  
    plotNtFrequency-methods                 html  
    plotPCA-methods                         html  
    plotQuality-methods                     html  
    plotRLE-methods                         html  
    withinLaneNormalization-methods         html  
    yeastGC                                 html  
    yeastLength                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'EDASeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EDASeq' as EDASeq_2.16.3.zip
* DONE (EDASeq)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'EDASeq' successfully unpacked and MD5 sums checked
In R CMD INSTALL