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INSTALL report for DESeq on malbec1

This page was generated on 2019-04-16 11:48:50 -0400 (Tue, 16 Apr 2019).

Package 398/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DESeq 1.34.1
Simon Anders
Snapshot Date: 2019-04-15 17:01:12 -0400 (Mon, 15 Apr 2019)
URL: https://git.bioconductor.org/packages/DESeq
Branch: RELEASE_3_8
Last Commit: e86f1b0
Last Changed Date: 2019-01-04 13:29:25 -0400 (Fri, 04 Jan 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: DESeq
Version: 1.34.1
Command: /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL DESeq
StartedAt: 2019-04-15 18:02:40 -0400 (Mon, 15 Apr 2019)
EndedAt: 2019-04-15 18:02:52 -0400 (Mon, 15 Apr 2019)
EllapsedTime: 12.5 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.8-bioc/R/bin/R CMD INSTALL DESeq
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* installing to library ‘/home/biocbuild/bbs-3.8-bioc/R/library’
* installing *source* package ‘DESeq’ ...
** libs
gcc -I"/home/biocbuild/bbs-3.8-bioc/R/include" -DNDEBUG   -I/usr/local/include   -fpic  -g -O2  -Wall -c pval.c -o pval.o
pval.c: In function ‘add_from_both_sides’:
pval.c:26:11: warning: unused variable ‘esttotalperlength’ [-Wunused-variable]
    double esttotalperlength = total/2;
           ^
gcc -shared -L/home/biocbuild/bbs-3.8-bioc/R/lib -L/usr/local/lib -o DESeq.so pval.o -L/home/biocbuild/bbs-3.8-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.8-bioc/R/library/DESeq/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (DESeq)