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INSTALL report for BubbleTree on tokay1

This page was generated on 2019-04-13 11:24:55 -0400 (Sat, 13 Apr 2019).

Package 182/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BubbleTree 2.12.0
Todd Creasy , Wei Zhu
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/BubbleTree
Branch: RELEASE_3_8
Last Commit: 4eeb280
Last Changed Date: 2018-10-30 11:41:56 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BubbleTree
Version: 2.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/BubbleTree_2.12.0.tar.gz && rm -rf BubbleTree.buildbin-libdir && mkdir BubbleTree.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BubbleTree.buildbin-libdir BubbleTree_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL BubbleTree_2.12.0.zip && rm BubbleTree_2.12.0.tar.gz BubbleTree_2.12.0.zip
StartedAt: 2019-04-12 20:14:46 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 20:16:18 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 92.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/BubbleTree_2.12.0.tar.gz && rm -rf BubbleTree.buildbin-libdir && mkdir BubbleTree.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BubbleTree.buildbin-libdir BubbleTree_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL BubbleTree_2.12.0.zip && rm BubbleTree_2.12.0.tar.gz BubbleTree_2.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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100 23.7M  100 23.7M    0     0  91.4M      0 --:--:-- --:--:-- --:--:-- 92.7M

install for i386

* installing *source* package 'BubbleTree' ...
It is recommended to use 'given' instead of 'middle'.
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BubbleTree'
    finding HTML links ... done
    Annotate                                html  
    BTreePlotter                            html  
    BTreePredictor                          html  
    RBD                                     html  
    RscoreTrack                             html  
    TrackPlotter                            html  
    all.somatic.lst                         html  
    allCNV.lst                              html  
    allCall.lst                             html  
    allHetero.lst                           html  
    allRBD.lst                              html  
    annoByGenesAndCyto                      html  
    bafTrack                                html  
    btcompare                               html  
    btpredict                               html  
    cancer.genes.minus2                     html  
    centromere.dat                          html  
    cnv.gr                                  html  
    cyto.gr                                 html  
    drawBTree                               html  
    drawBubbles                             html  
    drawFeatures                            html  
    gene.uni.clean.gr                       html  
    getTracks                               html  
    heteroLociTrack                         html  
    hg19.seqinfo                            html  
    info                                    html  
    loadRBD                                 html  
    makeRBD                                 html  
    mergeSnpCnv                             html  
    saveXLS                                 html  
    snp.gr                                  html  
    trackBTree                              html  
    vol.genes                               html  
    xyTrack                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'BubbleTree' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BubbleTree' as BubbleTree_2.12.0.zip
* DONE (BubbleTree)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'BubbleTree' successfully unpacked and MD5 sums checked
In R CMD INSTALL