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INSTALL report for compEpiTools on tokay2

This page was generated on 2018-10-17 08:39:06 -0400 (Wed, 17 Oct 2018).

Package 294/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
compEpiTools 1.14.1
Kamal Kishore
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/compEpiTools
Branch: RELEASE_3_7
Last Commit: d9d95f0
Last Changed Date: 2018-05-22 07:28:58 -0400 (Tue, 22 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: compEpiTools
Version: 1.14.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/compEpiTools_1.14.1.tar.gz && rm -rf compEpiTools.buildbin-libdir && mkdir compEpiTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=compEpiTools.buildbin-libdir compEpiTools_1.14.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL compEpiTools_1.14.1.zip && rm compEpiTools_1.14.1.tar.gz compEpiTools_1.14.1.zip
StartedAt: 2018-10-16 20:38:48 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:40:18 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 89.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/compEpiTools_1.14.1.tar.gz && rm -rf compEpiTools.buildbin-libdir && mkdir compEpiTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=compEpiTools.buildbin-libdir compEpiTools_1.14.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL compEpiTools_1.14.1.zip && rm compEpiTools_1.14.1.tar.gz compEpiTools_1.14.1.zip
###
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install for i386

* installing *source* package 'compEpiTools' ...
** R
** inst
** byte-compile and prepare package for lazy loading

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
  converting help for package 'compEpiTools'
    finding HTML links ... done
    GR2fasta-methods                        html  
    GRanges2ucsc-methods                    html  
    GRangesInPromoters-methods              html  
    GRannotate-methods                      html  
    GRannotateSimple                        html  
    GRbaseCoverage-methods                  html  
    GRcoverage-methods                      html  
    GRcoverageSummit-methods                html  
    GRenrichment-methods                    html  
    GRmidpoint-methods                      html  
    GRsetwidth                              html  
    TSS                                     html  
    compEpiTools-package                    html  
    countOverlapsInBins-methods             html  
    distanceFromTSS-methods                 html  
    enhancers                               html  
    findLncRNA                              html  
    getPromoterClass-methods                html  
    finding level-2 HTML links ... done

    heatmapData                             html  
    heatmapPlot                             html  
    makeGtfFromDb                           html  
    matchEnhancers                          html  
    overlapOfGRanges-methods                html  
    palette2d                               html  
    plotStallingIndex                       html  
    simplifyGOterms                         html  
    stallingIndex                           html  
    topGOres                                html  
    ucsc2GRanges                            html  
    unionMaxScore-methods                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
In R CMD INSTALL

install for x64

* installing *source* package 'compEpiTools' ...
** testing if installed package can be loaded

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
* MD5 sums
packaged installation of 'compEpiTools' as compEpiTools_1.14.1.zip
* DONE (compEpiTools)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'compEpiTools' successfully unpacked and MD5 sums checked
In R CMD INSTALL