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INSTALL report for clstutils on tokay2

This page was generated on 2018-10-17 08:35:13 -0400 (Wed, 17 Oct 2018).

Package 259/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clstutils 1.28.0
Noah Hoffman
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/clstutils
Branch: RELEASE_3_7
Last Commit: f5f8a2d
Last Changed Date: 2018-04-30 10:35:16 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: clstutils
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/clstutils_1.28.0.tar.gz && rm -rf clstutils.buildbin-libdir && mkdir clstutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clstutils.buildbin-libdir clstutils_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL clstutils_1.28.0.zip && rm clstutils_1.28.0.tar.gz clstutils_1.28.0.zip
StartedAt: 2018-10-16 19:12:31 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:13:02 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 30.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/clstutils_1.28.0.tar.gz && rm -rf clstutils.buildbin-libdir && mkdir clstutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clstutils.buildbin-libdir clstutils_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL clstutils_1.28.0.zip && rm clstutils_1.28.0.tar.gz clstutils_1.28.0.zip
###
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install for i386

* installing *source* package 'clstutils' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'clstutils'
    finding HTML links ... done
    classifyPlacements                      html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpKyq5Tr/R.INSTALLf1c55511242/clstutils/man/classifyPlacements.Rd:31: file link 'classifyIter' in package 'clst' does not exist and so has been treated as a topic
    clstutils-package                       html  
    finding level-2 HTML links ... done

    findOutliers                            html  
    maxDists                                html  
    prettyTree                              html  
    refpkgContents                          html  
    seqdat                                  html  
    seqs                                    html  
    taxonomyFromRefpkg                      html  
    treeDists                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'clstutils' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'clstutils' as clstutils_1.28.0.zip
* DONE (clstutils)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'clstutils' successfully unpacked and MD5 sums checked
In R CMD INSTALL