Back to Multiple platform build/check report for BioC 3.7
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for ATACseqQC on tokay2

This page was generated on 2018-10-17 08:43:57 -0400 (Wed, 17 Oct 2018).

Package 80/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ATACseqQC 1.4.3
Jianhong Ou
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/ATACseqQC
Branch: RELEASE_3_7
Last Commit: 29b48ac
Last Changed Date: 2018-09-27 12:50:36 -0400 (Thu, 27 Sep 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ATACseqQC
Version: 1.4.3
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ATACseqQC_1.4.3.tar.gz && rm -rf ATACseqQC.buildbin-libdir && mkdir ATACseqQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ATACseqQC.buildbin-libdir ATACseqQC_1.4.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ATACseqQC_1.4.3.zip && rm ATACseqQC_1.4.3.tar.gz ATACseqQC_1.4.3.zip
StartedAt: 2018-10-16 20:06:07 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:07:33 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 85.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ATACseqQC_1.4.3.tar.gz && rm -rf ATACseqQC.buildbin-libdir && mkdir ATACseqQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ATACseqQC.buildbin-libdir ATACseqQC_1.4.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ATACseqQC_1.4.3.zip && rm ATACseqQC_1.4.3.tar.gz ATACseqQC_1.4.3.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 11.0M  100 11.0M    0     0  55.6M      0 --:--:-- --:--:-- --:--:-- 57.4M

install for i386

* installing *source* package 'ATACseqQC' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ATACseqQC'
    finding HTML links ... done
    ATACseqQC-package                       html  
    NFRscore                                html  
    PTscore                                 html  
    bamQC                                   html  
    distanceDyad                            html  
    enrichedFragments                       html  
    estimateLibComplexity                   html  
    factorFootprints                        html  
    footprintsScanner                       html  
    fragSizeDist                            html  
    peakdet                                 html  
    plotCorrelation                         html  
    plotFootprints                          html  
    prepareBindingSitesList                 html  
    pwmscores                               html  
    readBamFile                             html  
    finding level-2 HTML links ... done

    readsDupFreq                            html  
    saturationPlot                          html  
    shiftGAlignmentsList                    html  
    shiftReads                              html  
    splitBam                                html  
    splitGAlignmentsByCut                   html  
    vPlot                                   html  
    writeListOfGAlignments                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'ATACseqQC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ATACseqQC' as ATACseqQC_1.4.3.zip
* DONE (ATACseqQC)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'ATACseqQC' successfully unpacked and MD5 sums checked
In R CMD INSTALL