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INSTALL report for tigre on tokay2

This page was generated on 2018-10-17 08:34:42 -0400 (Wed, 17 Oct 2018).

Package 1480/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
tigre 1.34.0
Antti Honkela
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/tigre
Branch: RELEASE_3_7
Last Commit: 024adbf
Last Changed Date: 2018-04-30 10:35:13 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: tigre
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/tigre_1.34.0.tar.gz && rm -rf tigre.buildbin-libdir && mkdir tigre.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=tigre.buildbin-libdir tigre_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL tigre_1.34.0.zip && rm tigre_1.34.0.tar.gz tigre_1.34.0.zip
StartedAt: 2018-10-16 19:13:36 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:14:39 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 62.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/tigre_1.34.0.tar.gz && rm -rf tigre.buildbin-libdir && mkdir tigre.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=tigre.buildbin-libdir tigre_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL tigre_1.34.0.zip && rm tigre_1.34.0.tar.gz tigre_1.34.0.zip
###
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install for i386

* installing *source* package 'tigre' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c miscCFunctions.c -o miscCFunctions.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o tigre.dll tmp.def miscCFunctions.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/tigre.buildbin-libdir/tigre/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'tigre'
    finding HTML links ... done
    ExpressionTimeSeries-class              html  
    finding level-2 HTML links ... done

    GPLearn                                 html  
    GPModel-class                           html  
    GPPlot                                  html  
    GPRankTargets                           html  
    SCGoptim                                html  
    drosophila_gpsim_fragment               html  
    drosophila_mmgmos_fragment              html  
    expTransform                            html  
    export                                  html  
    generateModels                          html  
    gpsimCreate                             html  
    kernCompute                             html  
    kernCreate                              html  
    kernDiagGradX                           html  
    kernGradient                            html  
    lnDiffErfs                              html  
    modelDisplay                            html  
    modelExpandParam                        html  
    modelExtractParam                       html  
    modelGradient                           html  
    modelTieParam                           html  
    optimiDefaultConstraint                 html  
    plotTimeseries                          html  
    processData                             html  
    scoreList-class                         html  
    tigre-package                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'tigre' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c miscCFunctions.c -o miscCFunctions.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o tigre.dll tmp.def miscCFunctions.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/tigre.buildbin-libdir/tigre/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'tigre' as tigre_1.34.0.zip
* DONE (tigre)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'tigre' successfully unpacked and MD5 sums checked
In R CMD INSTALL