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INSTALL report for savR on tokay2

This page was generated on 2018-10-17 08:38:06 -0400 (Wed, 17 Oct 2018).

Package 1315/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
savR 1.18.0
R. Brent Calder
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/savR
Branch: RELEASE_3_7
Last Commit: 8c3b6a7
Last Changed Date: 2018-04-30 10:35:32 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: savR
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/savR_1.18.0.tar.gz && rm -rf savR.buildbin-libdir && mkdir savR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=savR.buildbin-libdir savR_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL savR_1.18.0.zip && rm savR_1.18.0.tar.gz savR_1.18.0.zip
StartedAt: 2018-10-16 18:58:27 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:59:20 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 53.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/savR_1.18.0.tar.gz && rm -rf savR.buildbin-libdir && mkdir savR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=savR.buildbin-libdir savR_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL savR_1.18.0.zip && rm savR_1.18.0.tar.gz savR_1.18.0.zip
###
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install for i386

* installing *source* package 'savR' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'savR'
    finding HTML links ... done
    buildReports                            html  
    clusterQualityGtN                       html  
    clusters                                html  
    correctedIntensities                    html  
    cycles                                  html  
    directions                              html  
    errorMetrics                            html  
    extractionMetrics                       html  
    flowcellLayout                          html  
    illuminaFlowCellLayout-class            html  
    illuminaRead-class                      html  
    location                                html  
    pfBoxplot                               html  
    pfClusters                              html  
    plotFWHM                                html  
    plotIntensity                           html  
    plotQGT30                               html  
    qualityHeatmap                          html  
    qualityMetrics                          html  
    reads                                   html  
    run                                     html  
    savCorrectedIntensityFormat-class       html  
    savData-class                           html  
    savErrorFormat-class                    html  
    savExtractionFormat-class               html  
    savFormat-class                         html  
    savProject-class                        html  
    savQualityFormat-class                  html  
    savQualityFormatV5-class                html  
    savR-package                            html  
    savR                                    html  
    savTileFormat-class                     html  
    tileMetrics                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'savR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'savR' as savR_1.18.0.zip
* DONE (savR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'savR' successfully unpacked and MD5 sums checked
In R CMD INSTALL