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INSTALL report for ontoProc on tokay2

This page was generated on 2018-10-17 08:44:50 -0400 (Wed, 17 Oct 2018).

Package 1029/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ontoProc 1.2.1
VJ Carey
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/ontoProc
Branch: RELEASE_3_7
Last Commit: 4162d1e
Last Changed Date: 2018-05-11 16:17:31 -0400 (Fri, 11 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ontoProc
Version: 1.2.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ontoProc_1.2.1.tar.gz && rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ontoProc.buildbin-libdir ontoProc_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.2.1.zip && rm ontoProc_1.2.1.tar.gz ontoProc_1.2.1.zip
StartedAt: 2018-10-16 18:54:40 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:55:39 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 58.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ontoProc_1.2.1.tar.gz && rm -rf ontoProc.buildbin-libdir && mkdir ontoProc.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ontoProc.buildbin-libdir ontoProc_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ontoProc_1.2.1.zip && rm ontoProc_1.2.1.tar.gz ontoProc_1.2.1.zip
###
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100 21.7M  100 21.7M    0     0  72.3M      0 --:--:-- --:--:-- --:--:-- 73.9M

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  restoring symbolic link as a file copy
* installing *source* package 'ontoProc' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ontoProc'
    finding HTML links ... done
    TermSet-class                           html  
    allGOterms                              html  
    c-TermSet-method                        html  
    cellTypeToGO                            html  
    cleanCLOnames                           html  
    demoApp                                 html  
    dropStop                                html  
    fastGrep                                html  
    getCellOnto                             html  
    humrna                                  html  
    makeSelectInput                         html  
    minicorpus                              html  
    nomenCheckup                            html  
    secLevGen                               html  
    siblings_TAG                            html  
    stopWords                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  restoring symbolic link as a file copy
* installing *source* package 'ontoProc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ontoProc' as ontoProc_1.2.1.zip
* DONE (ontoProc)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'ontoProc' successfully unpacked and MD5 sums checked
In R CMD INSTALL