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INSTALL report for karyoploteR on tokay2

This page was generated on 2018-10-17 08:43:24 -0400 (Wed, 17 Oct 2018).

Package 769/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
karyoploteR 1.6.3
Bernat Gel
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/karyoploteR
Branch: RELEASE_3_7
Last Commit: 8dfb702
Last Changed Date: 2018-09-21 06:36:38 -0400 (Fri, 21 Sep 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: karyoploteR
Version: 1.6.3
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/karyoploteR_1.6.3.tar.gz && rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.6.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL karyoploteR_1.6.3.zip && rm karyoploteR_1.6.3.tar.gz karyoploteR_1.6.3.zip
StartedAt: 2018-10-16 20:25:00 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:26:45 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 104.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/karyoploteR_1.6.3.tar.gz && rm -rf karyoploteR.buildbin-libdir && mkdir karyoploteR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=karyoploteR.buildbin-libdir karyoploteR_1.6.3.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL karyoploteR_1.6.3.zip && rm karyoploteR_1.6.3.tar.gz karyoploteR_1.6.3.zip
###
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install for i386

* installing *source* package 'karyoploteR' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'karyoploteR'
    finding HTML links ... done
    darker                                  html  
    filterParams                            html  
    getChromosomeNamesBoundingBox           html  
    getCytobandColors                       html  
    getCytobands                            html  
    finding level-2 HTML links ... done

    getDefaultPlotParams                    html  
    getMainTitleBoundingBox                 html  
    getVariantsColors                       html  
    kpAbline                                html  
    kpAddBaseNumbers                        html  
    kpAddChromosomeNames                    html  
    kpAddCytobandLabels                     html  
    kpAddCytobands                          html  
    kpAddCytobandsAsLine                    html  
    kpAddLabels                             html  
    kpAddMainTitle                          html  
    kpArea                                  html  
    kpArrows                                html  
    kpAxis                                  html  
    kpBars                                  html  
    kpDataBackground                        html  
    kpHeatmap                               html  
    kpLines                                 html  
    kpPlotBAMDensity                        html  
    kpPlotCoverage                          html  
    kpPlotDensity                           html  
    kpPlotGenes                             html  
    kpPlotLinks                             html  
    kpPlotLoess                             html  
    kpPlotMarkers                           html  
    kpPlotNames                             html  
    kpPlotRainfall                          html  
    kpPlotRegions                           html  
    kpPlotRibbon                            html  
    kpPlotTranscripts                       html  
    kpPoints                                html  
    kpPolygon                               html  
    kpRect                                  html  
    kpSegments                              html  
    kpText                                  html  
    lighter                                 html  
    makeGenesDataFromTxDb                   html  
    plotDefaultPlotParams                   html  
    plotKaryotype                           html  
    prepareParameters2                      html  
    prepareParameters4                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'karyoploteR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'karyoploteR' as karyoploteR_1.6.3.zip
* DONE (karyoploteR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'karyoploteR' successfully unpacked and MD5 sums checked
In R CMD INSTALL