VJ Carey
| Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018) |
| URL: https://git.bioconductor.org/packages/gwascat |
| Branch: RELEASE_3_7 |
| Last Commit: 3bf7fb5 |
| Last Changed Date: 2018-04-30 10:35:23 -0400 (Mon, 30 Apr 2018) |
| Back to Multiple platform build/check report for BioC 3.7 |
|
This page was generated on 2018-10-17 08:36:04 -0400 (Wed, 17 Oct 2018).
| Package 668/1561 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| gwascat 2.12.0 VJ Carey
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: gwascat |
| Version: 2.12.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/gwascat_2.12.0.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL gwascat_2.12.0.zip && rm gwascat_2.12.0.tar.gz gwascat_2.12.0.zip |
| StartedAt: 2018-10-16 20:34:42 -0400 (Tue, 16 Oct 2018) |
| EndedAt: 2018-10-16 20:37:06 -0400 (Tue, 16 Oct 2018) |
| EllapsedTime: 143.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/gwascat_2.12.0.tar.gz && rm -rf gwascat.buildbin-libdir && mkdir gwascat.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gwascat.buildbin-libdir gwascat_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL gwascat_2.12.0.zip && rm gwascat_2.12.0.tar.gz gwascat_2.12.0.zip
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75 35.6M 75 26.8M 0 0 84.7M 0 --:--:-- --:--:-- --:--:-- 86.4M
100 35.6M 100 35.6M 0 0 88.4M 0 --:--:-- --:--:-- --:--:-- 89.7M
install for i386
* installing *source* package 'gwascat' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'gwascat'
finding HTML links ... done
bindcadd_snv html
gwascat-package html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpU15Yml/R.INSTALL27f89db651/gwascat/man/gwascat-package.Rd:76: file link 'nodeData' in package 'graph' does not exist and so has been treated as a topic
gwastagger html
gwaswloc-class html
finding level-2 HTML links ... done
gwcex2gviz html
gwdf_2012_02_02 html
ldtagr html
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpU15Yml/R.INSTALL27f89db651/gwascat/man/ldtagr.Rd:19: file link 'genotypeToSnpMatrix' in package 'VariantAnnotation' does not exist and so has been treated as a topic
locon6 html
makeCurrentGwascat html
obo2graphNEL html
riskyAlleleCount html
topTraits html
traitsManh html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'gwascat' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'gwascat' as gwascat_2.12.0.zip
* DONE (gwascat)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'gwascat' successfully unpacked and MD5 sums checked
In R CMD INSTALL