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INSTALL report for graph on tokay2

This page was generated on 2018-10-17 08:31:50 -0400 (Wed, 17 Oct 2018).

Package 644/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
graph 1.58.2
Bioconductor Package Maintainer
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/graph
Branch: RELEASE_3_7
Last Commit: 6455d8e
Last Changed Date: 2018-10-09 10:23:05 -0400 (Tue, 09 Oct 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: graph
Version: 1.58.2
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/graph_1.58.2.tar.gz && rm -rf graph.buildbin-libdir && mkdir graph.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=graph.buildbin-libdir graph_1.58.2.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL graph_1.58.2.zip && rm graph_1.58.2.tar.gz graph_1.58.2.zip
StartedAt: 2018-10-16 18:37:32 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:39:37 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 124.7 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/graph_1.58.2.tar.gz && rm -rf graph.buildbin-libdir && mkdir graph.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=graph.buildbin-libdir graph_1.58.2.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL graph_1.58.2.zip && rm graph_1.58.2.tar.gz graph_1.58.2.zip
###
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100  328k  100  328k    0     0  5251k      0 --:--:-- --:--:-- --:--:-- 5868k

install for i386

* installing *source* package 'graph' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c graph.c -o graph.o
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o graph.dll tmp.def graph.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
mv graph.dll BioC_graph.dll
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/graph.buildbin-libdir/graph/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'graph'
    finding HTML links ... done
    DFS                                     html  
    IMCA                                    html  
    MAPKsig                                 html  
    MultiGraph-class                        html  
    acc-methods                             html  
    addEdge                                 html  
    addNode                                 html  
    adj-methods                             html  
    adjacencyMatrix                         html  
    apoptosisGraph                          html  
    attrData-class                          html  
    attrDataItem-methods                    html  
    attrDefaults-methods                    html  
    aveNumEdges                             html  
    biocRepos                               html  
    boundary                                html  
    calcProb                                html  
    calcSumProb                             html  
    clearNode                               html  
    clusterGraph-class                      html  
    clusteringCoefficient-methods           html  
    combineNodes                            html  
    defunct                                 html  
    distGraph-class                         html  
    duplicatedEdges                         html  
    edgeData-methods                        html  
    edgeDataDefaults-methods                html  
    edgeMatrix                              html  
    edgeSets                                html  
    edgeWeights                             html  
    fromGXL-methods                         html  
    graph-class                             html  
    graph2SparseM                           html  
    graphAM-class                           html  
    graphBAM-class                          html  
    graphExamples                           html  
    graphNEL-class                          html  
    inEdges                                 html  
    internal                                html  
    isAdjacent-methods                      html  
    isDirected-methods                      html  
    leaves                                  html  
    listEdges                               html  
    matrix2Graph                            html  
    mostEdges                               html  
    multigraph                              html  
    nodeData-methods                        html  
    nodeDataDefaults-methods                html  
    numNoEdges                              html  
    pancrCaIni                              html  
    randomEGraph                            html  
    randomGraph                             html  
    randomNodeGraph                         html  
    removeEdge                              html  
    removeNode                              html  
    renderInfo-class                        html  
    reverseEdgeDirections                   html  
    settings                                html  
    simpleEdge-class                        html  
    standardLabeling                        html  
    subGraph                                html  
    toDotR-methods                          html  
    toDotWithRI                             html  
    ugraph                                  html  
    validGraph                              html  
    write.tlp                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'graph' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c graph.c -o graph.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o graph.dll tmp.def graph.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
mv graph.dll BioC_graph.dll
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/graph.buildbin-libdir/graph/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'graph' as graph_1.58.2.zip
* DONE (graph)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'graph' successfully unpacked and MD5 sums checked
In R CMD INSTALL