Back to Multiple platform build/check report for BioC 3.7
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

INSTALL report for epivizrData on tokay2

This page was generated on 2018-10-17 08:42:16 -0400 (Wed, 17 Oct 2018).

Package 457/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epivizrData 1.8.0
Hector Corrada Bravo
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/epivizrData
Branch: RELEASE_3_7
Last Commit: fea1420
Last Changed Date: 2018-04-30 10:35:42 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: epivizrData
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/epivizrData_1.8.0.tar.gz && rm -rf epivizrData.buildbin-libdir && mkdir epivizrData.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epivizrData.buildbin-libdir epivizrData_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL epivizrData_1.8.0.zip && rm epivizrData_1.8.0.tar.gz epivizrData_1.8.0.zip
StartedAt: 2018-10-16 19:58:40 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:59:40 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 60.2 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/epivizrData_1.8.0.tar.gz && rm -rf epivizrData.buildbin-libdir && mkdir epivizrData.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epivizrData.buildbin-libdir epivizrData_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL epivizrData_1.8.0.zip && rm epivizrData_1.8.0.tar.gz epivizrData_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 32934  100 32934    0     0   585k      0 --:--:-- --:--:-- --:--:--  670k

install for i386

* installing *source* package 'epivizrData' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Note: next used in wrong context: no loop is visible 
** help
*** installing help indices
  converting help for package 'epivizrData'
    finding HTML links ... done
    EpivizBlockData-class                   html  
    finding level-2 HTML links ... done

    EpivizBpData-class                      html  
    EpivizData-class                        html  
    EpivizDataMgr-class                     html  
    EpivizFeatureData-class                 html  
    EpivizGeneInfoData-class                html  
    EpivizMeasurement-class                 html  
    ahToMySQL                               html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmpmch2VJ/R.INSTALL1c043b4e3341/epivizrData/man/ahToMySQL.Rd:10: file link 'AnnotationHub' in package 'AnnotationHub' does not exist and so has been treated as a topic
    as.data.frame-EpivizData-method         html  
    as.list-EpivizMeasurement-method        html  
    createMgr                               html  
    epivizrData                             html  
    register                                html  
    show-EpivizMeasurement-method           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'epivizrData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'epivizrData' as epivizrData_1.8.0.zip
* DONE (epivizrData)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'epivizrData' successfully unpacked and MD5 sums checked
In R CMD INSTALL