Back to Multiple platform build/check report for BioC 3.7
ABCDEFGHIJKLMNOPQRS[T]UVWXYZ

BUILD BIN report for TCGAutils on tokay2

This page was generated on 2018-10-17 08:45:49 -0400 (Wed, 17 Oct 2018).

Package 1469/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCGAutils 1.0.1
Marcel Ramos
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/TCGAutils
Branch: RELEASE_3_7
Last Commit: 24cf27c
Last Changed Date: 2018-06-18 12:13:14 -0400 (Mon, 18 Jun 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: TCGAutils
Version: 1.0.1
Command: rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAutils.buildbin-libdir TCGAutils_1.0.1.tar.gz
StartedAt: 2018-10-17 07:03:49 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 07:04:16 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 27.5 seconds
RetCode: 0
Status:  OK  
PackageFile: TCGAutils_1.0.1.zip
PackageFileSize: 360.6 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf TCGAutils.buildbin-libdir && mkdir TCGAutils.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAutils.buildbin-libdir TCGAutils_1.0.1.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'TCGAutils' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TCGAutils'
    finding HTML links ... done
    ID-translation                          html  
    TCGAbarcode                             html  
    TCGAbiospec                             html  
    TCGAsampleSelect                        html  
    TCGAutils-package                       html  
    finding level-2 HTML links ... done

    clinicalNames                           html  
    curatedTCGAData-helpers                 html  
    diseaseCodes                            html  
    findGRangesCols                         html  
    generateMap                             html  
    getFileNames                            html  
    makeGRangesListFromCopyNumber           html  
    makeGRangesListFromExonFiles            html  
    makeSummarizedExperimentFromGISTIC      html  
    mergeColData                            html  
    sampleTypes                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'TCGAutils' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TCGAutils' as TCGAutils_1.0.1.zip
* DONE (TCGAutils)
In R CMD INSTALL
In R CMD INSTALL