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INSTALL report for SigCheck on tokay2

This page was generated on 2018-10-17 08:39:28 -0400 (Wed, 17 Oct 2018).

Package 1365/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SigCheck 2.12.0
Rory Stark
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/SigCheck
Branch: RELEASE_3_7
Last Commit: df8fd2a
Last Changed Date: 2018-04-30 10:35:34 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SigCheck
Version: 2.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/SigCheck_2.12.0.tar.gz && rm -rf SigCheck.buildbin-libdir && mkdir SigCheck.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SigCheck.buildbin-libdir SigCheck_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL SigCheck_2.12.0.zip && rm SigCheck_2.12.0.tar.gz SigCheck_2.12.0.zip
StartedAt: 2018-10-16 20:25:12 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:26:03 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 51.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/SigCheck_2.12.0.tar.gz && rm -rf SigCheck.buildbin-libdir && mkdir SigCheck.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SigCheck.buildbin-libdir SigCheck_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL SigCheck_2.12.0.zip && rm SigCheck_2.12.0.tar.gz SigCheck_2.12.0.zip
###
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install for i386

* installing *source* package 'SigCheck' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
Creating a new generic function for 'signature' in package 'SigCheck'
** help
*** installing help indices
  converting help for package 'SigCheck'
    finding HTML links ... done
    SigCheck-package                        html  
    finding level-2 HTML links ... done

    SigCheckObject-class                    html  
    classifyResults                         html  
    knownSignatures                         html  
    nkiResults                              html  
    sigCheck                                html  
    sigCheckAll                             html  
    sigCheckKnown                           html  
    sigCheckPermuted                        html  
    sigCheckPlot                            html  
    sigCheckRandom                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
In R CMD INSTALL

install for x64

* installing *source* package 'SigCheck' ...
** testing if installed package can be loaded
Warning: replacing previous import 'BiocGenerics::var' by 'stats::var' when loading 'MLInterfaces'
* MD5 sums
packaged installation of 'SigCheck' as SigCheck_2.12.0.zip
* DONE (SigCheck)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'SigCheck' successfully unpacked and MD5 sums checked
In R CMD INSTALL