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BUILD BIN report for Pbase on tokay2

This page was generated on 2018-10-17 08:38:47 -0400 (Wed, 17 Oct 2018).

Package 1067/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Pbase 0.20.0
Sebastian Gibb
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/Pbase
Branch: RELEASE_3_7
Last Commit: 8f2d5a5
Last Changed Date: 2018-04-30 10:35:33 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Pbase
Version: 0.20.0
Command: rm -rf Pbase.buildbin-libdir && mkdir Pbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Pbase.buildbin-libdir Pbase_0.20.0.tar.gz
StartedAt: 2018-10-17 06:46:43 -0400 (Wed, 17 Oct 2018)
EndedAt: 2018-10-17 06:47:48 -0400 (Wed, 17 Oct 2018)
EllapsedTime: 65.1 seconds
RetCode: 0
Status:  OK  
PackageFile: Pbase_0.20.0.zip
PackageFileSize: 4.378 MiB

Command output

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###
### Running command:
###
###   rm -rf Pbase.buildbin-libdir && mkdir Pbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Pbase.buildbin-libdir Pbase_0.20.0.tar.gz
###
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install for i386

* installing *source* package 'Pbase' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Pbase'
    finding HTML links ... done
    Pparams-class                           html  
    Proteins-class                          html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpO2k8im/R.INSTALL224410b7506d/Pbase/man/Proteins-class.Rd:121: file link 'proteins' in package 'ensembldb' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpO2k8im/R.INSTALL224410b7506d/Pbase/man/Proteins-class.Rd:126: file link 'listColumns' in package 'ensembldb' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpO2k8im/R.INSTALL224410b7506d/Pbase/man/Proteins-class.Rd:232: file link 'cleave' in package 'cleaver' does not exist and so has been treated as a topic
    calculateHeavyLabels                    html  
    coordinate-mapping-methods              html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpO2k8im/R.INSTALL224410b7506d/Pbase/man/coordinate-mapping-methods.Rd:124: file link 'mapToAlignments' in package 'GenomicAlignments' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpO2k8im/R.INSTALL224410b7506d/Pbase/man/coordinate-mapping-methods.Rd:129: file link 'mapToTranscripts' in package 'GenomicFeatures' does not exist and so has been treated as a topic
    etrid2grl                               html  
    isReverse                               html  
    p                                       html  
    plotAsAnnotationTrack                   html  
    proteinCoding-methods                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'Pbase' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Pbase' as Pbase_0.20.0.zip
* DONE (Pbase)
In R CMD INSTALL
In R CMD INSTALL