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INSTALL report for PAnnBuilder on tokay2

This page was generated on 2018-10-17 08:34:12 -0400 (Wed, 17 Oct 2018).

Package 1050/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PAnnBuilder 1.44.0
Li Hong
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/PAnnBuilder
Branch: RELEASE_3_7
Last Commit: fb00bda
Last Changed Date: 2018-04-30 10:35:10 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: PAnnBuilder
Version: 1.44.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/PAnnBuilder_1.44.0.tar.gz && rm -rf PAnnBuilder.buildbin-libdir && mkdir PAnnBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAnnBuilder.buildbin-libdir PAnnBuilder_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL PAnnBuilder_1.44.0.zip && rm PAnnBuilder_1.44.0.tar.gz PAnnBuilder_1.44.0.zip
StartedAt: 2018-10-16 19:00:17 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:03:37 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 200.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/PAnnBuilder_1.44.0.tar.gz && rm -rf PAnnBuilder.buildbin-libdir && mkdir PAnnBuilder.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAnnBuilder.buildbin-libdir PAnnBuilder_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL PAnnBuilder_1.44.0.zip && rm PAnnBuilder_1.44.0.tar.gz PAnnBuilder_1.44.0.zip
###
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install for i386

* installing *source* package 'PAnnBuilder' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PAnnBuilder'
    finding HTML links ... done
    GOABuilder_DB                           html  
    HomoloGeneBuilder_DB                    html  
    InParanoidBuilder_DB                    html  
    PeptideAtlasBuilder_DB                  html  
    bfBuilder_DB                            html  
    createAnnObjs                           html  
    crossBuilder_DB                         html  
    dNameBuilder_DB                         html  
    getSrcUrl                               html  
    initClasses                             html  
    intBuilder_DB                           html  
    loadFromUrl                             html  
    makeLLDB                                html  
    pBaseBuilder_DB                         html  
    pSeqBuilder_DB                          html  
    processData                             html  
    ptmBuilder_DB                           html  
    scopBuilder_DB                          html  
    subcellBuilder_DB                       html  
    writeData_DB                            html  
    writeManPage                            html  
    zzz                                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: Package 'PAnnBuilder' is deprecated and will be removed from
  Bioconductor version 3.7
In R CMD INSTALL

install for x64

* installing *source* package 'PAnnBuilder' ...
** testing if installed package can be loaded
Warning: Package 'PAnnBuilder' is deprecated and will be removed from
  Bioconductor version 3.7
* MD5 sums
packaged installation of 'PAnnBuilder' as PAnnBuilder_1.44.0.zip
* DONE (PAnnBuilder)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'PAnnBuilder' successfully unpacked and MD5 sums checked
In R CMD INSTALL