Back to Multiple platform build/check report for BioC 3.7
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

INSTALL report for NGScopy on tokay2

This page was generated on 2018-10-17 08:39:11 -0400 (Wed, 17 Oct 2018).

Package 995/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NGScopy 1.14.0
Xiaobei Zhao
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/NGScopy
Branch: RELEASE_3_7
Last Commit: 445095e
Last Changed Date: 2018-04-30 10:35:34 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: NGScopy
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/NGScopy_1.14.0.tar.gz && rm -rf NGScopy.buildbin-libdir && mkdir NGScopy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NGScopy.buildbin-libdir NGScopy_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL NGScopy_1.14.0.zip && rm NGScopy_1.14.0.tar.gz NGScopy_1.14.0.zip
StartedAt: 2018-10-16 19:03:24 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:05:34 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 129.6 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/NGScopy_1.14.0.tar.gz && rm -rf NGScopy.buildbin-libdir && mkdir NGScopy.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=NGScopy.buildbin-libdir NGScopy_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL NGScopy_1.14.0.zip && rm NGScopy_1.14.0.tar.gz NGScopy_1.14.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1822k  100 1822k    0     0  21.8M      0 --:--:-- --:--:-- --:--:-- 23.7M

install for i386

* installing *source* package 'NGScopy' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NGScopy'
    finding HTML links ... done
    NGScopy-class                           html  
    NGScopy-package                         html  
    df.to.gr                                html  
    help_segmtype                           html  
    ngscopy_cmdline_example                 html  
    ngscopy_unittest                        html  
    parse_segmtype                          html  
    read_regions                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'NGScopy' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'NGScopy' as NGScopy_1.14.0.zip
* DONE (NGScopy)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'NGScopy' successfully unpacked and MD5 sums checked
In R CMD INSTALL