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INSTALL report for ImpulseDE2 on tokay2

This page was generated on 2018-10-17 08:43:51 -0400 (Wed, 17 Oct 2018).

Package 732/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ImpulseDE2 1.4.0
David S Fischer
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/ImpulseDE2
Branch: RELEASE_3_7
Last Commit: 54f6015
Last Changed Date: 2018-04-30 10:35:46 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ImpulseDE2
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ImpulseDE2_1.4.0.tar.gz && rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ImpulseDE2_1.4.0.zip && rm ImpulseDE2_1.4.0.tar.gz ImpulseDE2_1.4.0.zip
StartedAt: 2018-10-16 20:37:15 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:38:28 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 73.6 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/ImpulseDE2_1.4.0.tar.gz && rm -rf ImpulseDE2.buildbin-libdir && mkdir ImpulseDE2.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ImpulseDE2.buildbin-libdir ImpulseDE2_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL ImpulseDE2_1.4.0.zip && rm ImpulseDE2_1.4.0.tar.gz ImpulseDE2_1.4.0.zip
###
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install for i386

* installing *source* package 'ImpulseDE2' ...
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'ImpulseDE2'
    finding HTML links ... done
    ImpulseDE2Object-class                  html  
    append_strReport                        html  
    computeNormConst                        html  
    computeSizeFactors                      html  
    estimateImpulseParam                    html  
    estimateSigmoidParam                    html  
    evalImpulse                             html  
    evalImpulse_comp                        html  
    evalLogLikImpulse                       html  
    evalLogLikImpulse_comp                  html  
    evalLogLikMu                            html  
    evalLogLikMu_comp                       html  
    evalLogLikSigmoid                       html  
    evalLogLikSigmoid_comp                  html  
    evalSigmoid                             html  
    evalSigmoid_comp                        html  
    fitConstImpulse                         html  
    fitConstImpulseGene                     html  
    fitConstModel                           html  
    fitImpulseModel                         html  
    fitModels                               html  
    fitSigmoidGene                          html  
    fitSigmoidModel                         html  
    fitSigmoidModels                        html  
    get_accessors                           html  
    list_accession                          html  
    plotGenes                               html  
    plotHeatmap                             html  
    processData                             html  
    runDEAnalysis                           html  
    runDESeq2                               html  
    runImpulseDE2                           html  
    set_accessors                           html  
    simulateDataSetImpulseDE2               html  
    updateDEAnalysis                        html  
    writeReportToFile                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'ImpulseDE2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ImpulseDE2' as ImpulseDE2_1.4.0.zip
* DONE (ImpulseDE2)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'ImpulseDE2' successfully unpacked and MD5 sums checked
In R CMD INSTALL