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INSTALL report for IPPD on tokay2

This page was generated on 2018-10-17 08:35:03 -0400 (Wed, 17 Oct 2018).

Package 749/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IPPD 1.28.0
Martin Slawski
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/IPPD
Branch: RELEASE_3_7
Last Commit: 813c02e
Last Changed Date: 2018-04-30 10:35:15 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: IPPD
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/IPPD_1.28.0.tar.gz && rm -rf IPPD.buildbin-libdir && mkdir IPPD.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IPPD.buildbin-libdir IPPD_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL IPPD_1.28.0.zip && rm IPPD_1.28.0.tar.gz IPPD_1.28.0.zip
StartedAt: 2018-10-16 18:53:22 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:54:00 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 38.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/IPPD_1.28.0.tar.gz && rm -rf IPPD.buildbin-libdir && mkdir IPPD.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IPPD.buildbin-libdir IPPD_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL IPPD_1.28.0.zip && rm IPPD_1.28.0.tar.gz IPPD_1.28.0.zip
###
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100 1049k  100 1049k    0     0  15.1M      0 --:--:-- --:--:-- --:--:-- 16.8M

install for i386

* installing *source* package 'IPPD' ...
** libs
C:/Rtools/mingw_32/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O3 -Wall  -std=gnu99 -mtune=generic -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:29:1: warning: missing braces around initializer [-Wmissing-braces]
 };
 ^
R_init_IPPD.c:29:1: warning: (near initialization for 'cmethods[10]') [-Wmissing-braces]
C:/Rtools/mingw_32/bin/gcc -shared -s -static-libgcc -o IPPD.dll tmp.def R_init_IPPD.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/IPPD.buildbin-libdir/IPPD/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'IPPD'
    finding HTML links ... done
    IPPD-package                            html  
    analyzeLCMS                             html  
    fitModelParameters                      html  
    getPeaklist                             html  
    internals                               html  
    modelfit-class                          html  
    myo500                                  html  
    peaklist-class                          html  
    read.mzXML                              html  
    sweepline                               html  
    toyspectrum                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'IPPD' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c R_init_IPPD.c -o R_init_IPPD.o
R_init_IPPD.c:29:1: warning: missing braces around initializer [-Wmissing-braces]
 };
 ^
R_init_IPPD.c:29:1: warning: (near initialization for 'cmethods[10]') [-Wmissing-braces]
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o IPPD.dll tmp.def R_init_IPPD.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.7-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.7-bioc/meat/IPPD.buildbin-libdir/IPPD/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IPPD' as IPPD_1.28.0.zip
* DONE (IPPD)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'IPPD' successfully unpacked and MD5 sums checked
In R CMD INSTALL