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INSTALL report for Genominator on tokay2

This page was generated on 2018-10-17 08:34:31 -0400 (Wed, 17 Oct 2018).

Package 600/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Genominator 1.34.0
James Bullard
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/Genominator
Branch: RELEASE_3_7
Last Commit: 2810142
Last Changed Date: 2018-04-30 10:35:12 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: Genominator
Version: 1.34.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/Genominator_1.34.0.tar.gz && rm -rf Genominator.buildbin-libdir && mkdir Genominator.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Genominator.buildbin-libdir Genominator_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL Genominator_1.34.0.zip && rm Genominator_1.34.0.tar.gz Genominator_1.34.0.zip
StartedAt: 2018-10-16 19:44:21 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 19:45:18 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 57.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/Genominator_1.34.0.tar.gz && rm -rf Genominator.buildbin-libdir && mkdir Genominator.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Genominator.buildbin-libdir Genominator_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL Genominator_1.34.0.zip && rm Genominator_1.34.0.tar.gz Genominator_1.34.0.zip
###
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install for i386

* installing *source* package 'Genominator' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Genominator'
    finding HTML links ... done
    ExpData                                 html  
    Genominator                             html  
    addPrimingWeights                       html  
    aggregateExpData                        html  
    applyMapped                             html  
    collapseExpData                         html  
    computeCoverage                         html  
    computePrimingWeights                   html  
    getRegion                               html  
    importFromAlignedReads                  html  
    importToExpData                         html  
    joinExpData                             html  
    makeGeneRepresentation                  html  
    mergeWithAnnotation                     html  
    plot.genominator.coverage               html  
    plot.genominator.goodness.of.fit        html  
    regionGoodnessOfFit-methods             html  
    splitByAnnotation                       html  
    summarizeByAnnotation                   html  
    summarizeExpData                        html  
    validAnnotation                         html  
    yeastAnno                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'Genominator' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Genominator' as Genominator_1.34.0.zip
* DONE (Genominator)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'Genominator' successfully unpacked and MD5 sums checked
In R CMD INSTALL